PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744417.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 364aa MW: 40920.4 Da PI: 9.0561

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.2e-32	62	115	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_022744417.1 62 PRLRWTPDLHLRFVHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 115 8****************************************************7 PP
2	Myb_DNA-binding	53.8	4.6e-17	63	114	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_022744417.1 63 RLRWTPDLHLRFVHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 114 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MEGNSGIKCS KPSPSKQSQA ESESEENDGE SKPGNGRSSS NSTVEENEKK PSVRPYVRSK 60 MPRLRWTPDL HLRFVHAVER LGGQDRATPK LVLQLMNIKG LSIAHVKSHL QMYRSKKIDD 120 QGQVISDHRH LVESGDRNIY NLSQVLPMLQ GYNNHHQGNS SSSFRYGDAS WNGLECLMRN 180 PYTSRSFIDE QRLGLHGTVT QRIVGSNNIN WTNYTCRMGA SPFNALPSWK SHEVKNEFLT 240 SHNLESYQTK PRLGQIELNP VSPTQAKVED QTNFSTSGPS DLNKTNAQDF EAMKRKSSDC 300 NLDLDLSLRL TQVNEESQRS SKEDDVGSEL SLSLYSPSSS KLSRLKGDHR KESARRVSTL 360 DLTI

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MEGNSGIKCS KPSPSKQSQA ESESEENDGE SKPGNGRSSS NSTVEENEKK PSVRPYVRSK  60
MPRLRWTPDL HLRFVHAVER LGGQDRATPK LVLQLMNIKG LSIAHVKSHL QMYRSKKIDD  120
QGQVISDHRH LVESGDRNIY NLSQVLPMLQ GYNNHHQGNS SSSFRYGDAS WNGLECLMRN  180
PYTSRSFIDE QRLGLHGTVT QRIVGSNNIN WTNYTCRMGA SPFNALPSWK SHEVKNEFLT  240
SHNLESYQTK PRLGQIELNP VSPTQAKVED QTNFSTSGPS DLNKTNAQDF EAMKRKSSDC  300
NLDLDLSLRL TQVNEESQRS SKEDDVGSEL SLSLYSPSSS KLSRLKGDHR KESARRVSTL  360
DLTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-68	G2-like family protein