PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744328.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CAMTA

Protein Properties

Length: 1041aa MW: 116852 Da PI: 6.1911

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	108.1	5.4e-34	20	92	2	74
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLK 74 l+ ++rwl++ ei++iL n++k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK XP_022744328.1 20 LEAQHRWLRPAEICEILRNYQKFDIAAEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLK 92 5679********************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1041 aa Download sequence
MADRASYGLA SRLDIEQILL EAQHRWLRPA EICEILRNYQ KFDIAAEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKGSRTIGGI RETSAISNSR TSSPSTSSYS 120 VSHGKAPSGN ADSASPTRTL TSLCEDADSE DSQQANSRLH ISPQIGNASV MDDMNPGFLN 180 PYSTHPFPVE PDGNLKFLHY DHEGRSSIPG VNEVSHLHGD RLRGIDYGSH MTEAQRTLDL 240 ASRERGLEQY MPVYPAASSH ASMTSAQPDT VGISLQQENM IEGKLLDVKS AGEEFGNPLP 300 RKSNWQVFMI PLADNALELP KWPMDPSSDF ELPYDTRFFE QKSHDFHLLN ALEELISRDV 360 LNEQPVHKNL QMQLINADSN SVMKTYPEND MHLAGNINYA FSLKKSLLDG EDSLKKVDSF 420 SRWITKELGE VDDLQMQSSS GITWSTVECG NVSDDASLSP SLSQDQLFSI ADFSPKWAYI 480 DSETKVLIIG TFLKNQEEVA KYNWSCMFGE VEVPAEVIAD GILSCHASPL SVGQVPFYVT 540 CSNRLACSEV REFDYRAGFA NDINVSDIYG VASREMLRRF EMLLSLKSFS PPNHHFEGVG 600 EKRDLITKII LMKEEEECHQ IVDRSPDRDL SQHEEKECLL QKLMKEKLYS WLLHKIMEDG 660 KGPNILDEKG QGVLHLAAAL GYDWAVKPTV TAGVSINFRD VNGWTALHWA AFCGREQTVA 720 ILVSLGAAPG ALTDPSPEFL LGRTPADLAS GNGHKGISGF LAESSLTCFL SSLTMNDPKE 780 AVQIVSERMA TPVNDCDVQD ILSLKDSITA VCNATQAADR IHQMFRMQSF QRKQLSESGD 840 GVSDEHAISF LTAKARRPLQ SDGVAHAAAI QIQKKFRGWK KRKEFLLIRQ RIVKIQAHVR 900 GHQVRKQYRT IIWSVGILEK VILRWRRKGN GLRGFRRDAI TKEPDPQCMP SKEDDYDFLK 960 EGRKQTEERL QKALTRVKSM AQNSEGRGQY RRLLTLVQGI RENKACNMVQ SSSEEVADRD 1020 EDLIDIDSLL DDDTFMSIAF E

Sequence ? help Back to Top

Protein Sequence Length: 1041 aa Download sequence

MADRASYGLA SRLDIEQILL EAQHRWLRPA EICEILRNYQ KFDIAAEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKGSRTIGGI RETSAISNSR TSSPSTSSYS  120
VSHGKAPSGN ADSASPTRTL TSLCEDADSE DSQQANSRLH ISPQIGNASV MDDMNPGFLN  180
PYSTHPFPVE PDGNLKFLHY DHEGRSSIPG VNEVSHLHGD RLRGIDYGSH MTEAQRTLDL  240
ASRERGLEQY MPVYPAASSH ASMTSAQPDT VGISLQQENM IEGKLLDVKS AGEEFGNPLP  300
RKSNWQVFMI PLADNALELP KWPMDPSSDF ELPYDTRFFE QKSHDFHLLN ALEELISRDV  360
LNEQPVHKNL QMQLINADSN SVMKTYPEND MHLAGNINYA FSLKKSLLDG EDSLKKVDSF  420
SRWITKELGE VDDLQMQSSS GITWSTVECG NVSDDASLSP SLSQDQLFSI ADFSPKWAYI  480
DSETKVLIIG TFLKNQEEVA KYNWSCMFGE VEVPAEVIAD GILSCHASPL SVGQVPFYVT  540
CSNRLACSEV REFDYRAGFA NDINVSDIYG VASREMLRRF EMLLSLKSFS PPNHHFEGVG  600
EKRDLITKII LMKEEEECHQ IVDRSPDRDL SQHEEKECLL QKLMKEKLYS WLLHKIMEDG  660
KGPNILDEKG QGVLHLAAAL GYDWAVKPTV TAGVSINFRD VNGWTALHWA AFCGREQTVA  720
ILVSLGAAPG ALTDPSPEFL LGRTPADLAS GNGHKGISGF LAESSLTCFL SSLTMNDPKE  780
AVQIVSERMA TPVNDCDVQD ILSLKDSITA VCNATQAADR IHQMFRMQSF QRKQLSESGD  840
GVSDEHAISF LTAKARRPLQ SDGVAHAAAI QIQKKFRGWK KRKEFLLIRQ RIVKIQAHVR  900
GHQVRKQYRT IIWSVGILEK VILRWRRKGN GLRGFRRDAI TKEPDPQCMP SKEDDYDFLK  960
EGRKQTEERL QKALTRVKSM AQNSEGRGQY RRLLTLVQGI RENKACNMVQ SSSEEVADRD  1020
EDLIDIDSLL DDDTFMSIAF E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein