PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743757.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 478aa    MW: 53880.3 Da    PI: 6.0348
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS449.42.4e-137484741373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA++v++g+le+a+  L+++s+laspdgd+mqR+aayfteA a r+++ +++l kal++++ s  +++ee++++klf+e++P+lk+++
  XP_022743757.1  48 LIHLLVACANHVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEAFADRMLKAWPGLHKALNSTKIS--SVTEEIHVQKLFFELCPFLKLAY 140
                     689*************************************************************999998..6********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI+e +ege++vHiiD++ s+++QW++L+q++++Rpegpp+lRiTg+++    +ke l +++ rL++ Ae+l++pf+f + ++ +le+l+
  XP_022743757.1 141 VITNQAIVEGMEGEKMVHIIDLNSSEPAQWINLFQTFSARPEGPPHLRITGIHE----QKEVLDQMALRLTEEAEKLDIPFQFIP-IVCKLENLD 230
                     ******************************************************....9**************************.5788***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll...........................................................desvsles..er 224
                     le+Lrvk+gEal+V++vlqlh+ll                                                           ++++sl+   + 
  XP_022743757.1 231 LESLRVKTGEALVVSSVLQLHTLLatddemlrrnintpsmsknlntnrshrvlqmnqrilgewldkepvhiyspssdlttpspSSPLSLAPapKM 325
                     *********************************************************************************99666666555578 PP

            GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                      ++L +++ lsPk++vv+eqe++hn+++++er++eal++y+alfd+le++++r+  er+kvE++l+g+ei+n++aceg er++rhe+lekW  rl
  XP_022743757.1 326 GSFLTALRALSPKLIVVTEQESNHNGPTLMERVMEALNFYAALFDCLESTVSRAPLERQKVEKMLFGEEIKNIIACEGLERKQRHEKLEKWILRL 420
                     89********************************************************************************************* PP

            GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     e aGF+ vpls++ + qa +ll++ + dgy+++ee+g+l+++W++rpL+s+SaW
  XP_022743757.1 421 ELAGFGRVPLSYHGMLQAGRLLQTNNYDGYKIKEENGCLFMCWQERPLYSMSAW 474
                     ****************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MEGMIQEGPS SVTPSPLQVF PWMPLSPGLG SPFPWLQELK SEERGLCLIH LLVACANHVA  60
AGSLENANIG LEQISHLASP DGDTMQRIAA YFTEAFADRM LKAWPGLHKA LNSTKISSVT  120
EEIHVQKLFF ELCPFLKLAY VITNQAIVEG MEGEKMVHII DLNSSEPAQW INLFQTFSAR  180
PEGPPHLRIT GIHEQKEVLD QMALRLTEEA EKLDIPFQFI PIVCKLENLD LESLRVKTGE  240
ALVVSSVLQL HTLLATDDEM LRRNINTPSM SKNLNTNRSH RVLQMNQRIL GEWLDKEPVH  300
IYSPSSDLTT PSPSSPLSLA PAPKMGSFLT ALRALSPKLI VVTEQESNHN GPTLMERVME  360
ALNFYAALFD CLESTVSRAP LERQKVEKML FGEEIKNIIA CEGLERKQRH EKLEKWILRL  420
ELAGFGRVPL SYHGMLQAGR LLQTNNYDGY KIKEENGCLF MCWQERPLYS MSAWGFRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein