PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743398.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 570aa MW: 65257.3 Da PI: 6.6655

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.7	9e-30	122	207	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_022743398.1 122 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 207 8***********************************999*************************98..55667*****85 PP
2	trihelix	64.5	2.3e-20	417	498	2	83
trihelix 2 WtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 W+++ev Li++r++me+r+++g +++ lWee+++km+ gf rs+ +Ck+kw++++ + k+ke++kkr+++ s + y++ XP_022743398.1 417 WQESEVSRLIQLRTSMESRFEQGGfSEEILWEEIAAKMACLGFDRSALMCKDKWDSIAAYLMKTKESNKKRKEN-SIGYGYYH 498 *******************97538899***************************************9555.44777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MEMEDHHRHQ YGLPDLRQLL NGRPTHFQAI PQAEELFSSG HRNLPPPQQP HHPFDMMQMV 60 GRQVGHEFMP RRLHQEFPSD STANNATPTA AVATVTGAST PSASCRFDGE ATAFGGDGGT 120 GRWPRQETLT LLEIRSRLDP KFKEANQKGP LWDEVSRIMS EEHGYQRSGK KCREKFENLY 180 KYYKKTKEGK AGRQDGKHYR FFRQLEALYG ETSNSISGQE THLVGTNFRF HGTPNSNTQA 240 NQEVYHSQKP CDSLSLSNSS EFDTSSSDDN DISTAAAMEN DSSEKRKKKR GSRSWKAKIK 300 EFIDSQMRKL MERQEAWLEK LTKTLEQKEQ QRLLREEEWR KEEAARIDRE HKFWAKERAW 360 IEARDAALME ALQNLTGKQL KATSPEELMA SEMQNHSENQ NENGSEIINN TVKADGWQES 420 EVSRLIQLRT SMESRFEQGG FSEEILWEEI AAKMACLGFD RSALMCKDKW DSIAAYLMKT 480 KESNKKRKEN SIGYGYYHNN ESLYNQGRAY SEINEQGPDT LIRLQANDGS SPSNSNAGNA 540 VNDSCFRFLM ADGDNLWENY GLKLSKGENQ

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MEMEDHHRHQ YGLPDLRQLL NGRPTHFQAI PQAEELFSSG HRNLPPPQQP HHPFDMMQMV  60
GRQVGHEFMP RRLHQEFPSD STANNATPTA AVATVTGAST PSASCRFDGE ATAFGGDGGT  120
GRWPRQETLT LLEIRSRLDP KFKEANQKGP LWDEVSRIMS EEHGYQRSGK KCREKFENLY  180
KYYKKTKEGK AGRQDGKHYR FFRQLEALYG ETSNSISGQE THLVGTNFRF HGTPNSNTQA  240
NQEVYHSQKP CDSLSLSNSS EFDTSSSDDN DISTAAAMEN DSSEKRKKKR GSRSWKAKIK  300
EFIDSQMRKL MERQEAWLEK LTKTLEQKEQ QRLLREEEWR KEEAARIDRE HKFWAKERAW  360
IEARDAALME ALQNLTGKQL KATSPEELMA SEMQNHSENQ NENGSEIINN TVKADGWQES  420
EVSRLIQLRT SMESRFEQGG FSEEILWEEI AAKMACLGFD RSALMCKDKW DSIAAYLMKT  480
KESNKKRKEN SIGYGYYHNN ESLYNQGRAY SEINEQGPDT LIRLQANDGS SPSNSNAGNA  540
VNDSCFRFLM ADGDNLWENY GLKLSKGENQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-129	Trihelix family protein