PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022742771.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 353aa    MW: 38908.4 Da    PI: 8.0257
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022742771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.31.1e-32174230158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh hA+rR+Rg+gGrF
  XP_022742771.1 174 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHLHAMRRARGCGGRF 230
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MNPKPDGTNH PETNANNNKP PTVRSQPWWC STRHDSFLTD VLGESSTSLS PAKHPNGGLD  60
AKTSESLSVD GIDDKICSSK EMPLTILSDP DGKCGYEQPY LQHAIPIIHP TMGEYVAPPT  120
QLELVGHSIA CLSYPYADSY YGGVVPPYVP QSLVHSQCLG VHPARMALPL EMAEEPVYVN  180
AKQYHGILRR RQSRAKAELE KKLIKVRKPY LHESRHLHAM RRARGCGGRF LNMKKLDSDA  240
SNATSDKGNH TSSNLPSQYP NNSSSDRSIP NRMSQNANSS VGHQEVTESE LHGTNVQQAC  300
SNSNGNGCYP HHQGFHFSTS HSLPDKMTEG DCPRQQHERI VANGVPHRAL TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-50NF-YA family protein