PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742646.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 363aa MW: 40534.1 Da PI: 7.0882

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.9	3.5e-31	248	302	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fve+v+ LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR XP_022742646.1 248 KTRIRWTQDLHEKFVECVKCLGGAEKATPKAILKLMDTEGLTIFHVKSHLQKYRF 302 68****************************************************6 PP
2	Myb_DNA-binding	46.2	1e-14	252	301	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++v++vk lGg t+k+I + m +g+t ++ks++qky+ XP_022742646.1 252 RWTQDLHEKFVECVKCLGGAekaTPKAILKLMDtEGLTIFHVKSHLQKYR 301 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNTQKIDCQE YVEQNLGFIR DCNFEYVNHV GFQQPWNRGI RIQAPAMEGG SQQQNPGAAK 60 LSNTIMSGIQ SPASACYATE ICMGFPPYGS QKGSSSSCSQ YNNNCNSQFH SFHDSGENFS 120 IESVVQDEPN YELRNTLQPL VKSQICSNQY QKSSEKSYKI PCTNLQGSQV PSHDQCNLLG 180 NSAATVGNHF SVPFRGNQDQ RAYCNSYSSP LEQLSFFQQE KQSSNYSSGG FSVSSGNSVS 240 TGAVVASKTR IRWTQDLHEK FVECVKCLGG AEKATPKAIL KLMDTEGLTI FHVKSHLQKY 300 RFAKHMPDSA EGKLEKIIRT TDVTQIDVKT GLHLTEALQL QLDFQRRLHE QLEAEPWQRA 360 SDH

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNTQKIDCQE YVEQNLGFIR DCNFEYVNHV GFQQPWNRGI RIQAPAMEGG SQQQNPGAAK  60
LSNTIMSGIQ SPASACYATE ICMGFPPYGS QKGSSSSCSQ YNNNCNSQFH SFHDSGENFS  120
IESVVQDEPN YELRNTLQPL VKSQICSNQY QKSSEKSYKI PCTNLQGSQV PSHDQCNLLG  180
NSAATVGNHF SVPFRGNQDQ RAYCNSYSSP LEQLSFFQQE KQSSNYSSGG FSVSSGNSVS  240
TGAVVASKTR IRWTQDLHEK FVECVKCLGG AEKATPKAIL KLMDTEGLTI FHVKSHLQKY  300
RFAKHMPDSA EGKLEKIIRT TDVTQIDVKT GLHLTEALQL QLDFQRRLHE QLEAEPWQRA  360
SDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	8e-51	G2-like family protein