PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741725.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 928aa    MW: 102879 Da    PI: 6.5117
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.17.9e-24128229199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_022741725.1 128 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 218
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_022741725.1 219 KNQLLLGIRRA 229
                     9999****997 PP
2Auxin_resp121.65.9e-40254337183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022741725.1 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 337
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 928 aa     Download sequence    
MRLSSSGFNQ QTQEGEKKCL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDV YLLPAELGTP  120
SKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA RDLHDNEWKF  180
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNEKN QLLLGIRRAN RPQTVMPSSV  240
LSSDSMHIGL LAAAAHAAAT NSRFTIFYNP RASPSEFVIP LAKYVKAVYH TRVSVGMRFR  300
MLFETEESSV RRYMGTITGI SDLDPVRWPN SHWRSVKVGW DESTAGERQP RVSLWEIEPL  360
TTFPMYPSSF PLRLKRPWPS AVPSFHAFKD GDMSINSQLM WLQGGVGDQG IQSLNFQGFG  420
VAPWIQPRLD TSSIPGVQPD LYQAMAAAAL QEMRTVDSSK IGSQSLLQFQ QPQSTSNGSP  480
CLIQRQMLQQ SQTQNAFLQG FQENQTASQV QLLQQLQRAN SYNDQQQQQQ QQQQQQQQQQ  540
QQQQQQQQHQ QQPQQQQSQQ TQQLPQFSVP QQISNVIPAF PSASANQVQS SSLPAVASRC  600
QQQTFSDHLG NSIATSDVSS MQSILGSLSH AGASHLLNLS GSNPIISSSA LLSKPVAIEP  660
QLSSGPANRV LPQVEQLGSA QSNVSELSNL LPPFPGREYA AYHGSTEPQN NLLFGVSIDS  720
SSLMLQHGMT NLKNIRNEND SLSLPYAASN FTSASGTDFP LNSDMTTSSC VDESGYLQSS  780
ENVNHVNPPT RMYVKVHKSG SFGRSLDIST FSSYDELRFE LARMFGLEGQ LEDPQRSGWQ  840
LVFVDRENDI LLLGDDPWQE FVNNVWYIKV LSPLEVQQMG KEGLNPAASV PSQRLTAANS  900
SNNCDVYMSR QELRSSGNGV ASLGSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein