PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741193.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 516aa MW: 56438.4 Da PI: 4.7058

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	332	374	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_022741193.1 332 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 374 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MVLEANSLVW MDGEEEEDAV SSWTRNNSCS GNNEFETKED DLAISAASLS TFKSMLDTDW 60 YMNPAMNPEL QIRELGFCSN QVDDNLLIHQ QIDSSASCSP SQAFTLDPSH SHPFLPPKSC 120 FSSLLNVSCN NLFDNAFDFS SETAFLAQFQ PNQNPNLMGF PHSQICTPEF SSSSDFHCTR 180 LLTGTGNAFS LGSAFSAGGF DGFDGLGNAM FMNRAKILNT LEVFPSQPTL FQKRAAMRQG 240 SVGADKLGNL DVSGLRLGGE VSHGKRKRHE EGEIEEASID VSGLNYDFDE TNDDCKVDES 300 VNNGGCNSNT TSTVTGGVDQ GKKKGMPAKN LMAERRRRKK LNDRLYMLRS VVPKISKMDR 360 ASILGDAIDY LKELLQRIND LHTELEATPP GSLMPPSTSF HPLTPTPSTL PCGVKEELCP 420 SSLPSPKSQP AKVEVRVREG RAVNIHMFCA RRPGVLLSTM RALDNLGLDI QQAVISCFNG 480 FALDVFQAEQ CREGQDVLPE QIKAVLLDSA GFDGIM

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MVLEANSLVW MDGEEEEDAV SSWTRNNSCS GNNEFETKED DLAISAASLS TFKSMLDTDW  60
YMNPAMNPEL QIRELGFCSN QVDDNLLIHQ QIDSSASCSP SQAFTLDPSH SHPFLPPKSC  120
FSSLLNVSCN NLFDNAFDFS SETAFLAQFQ PNQNPNLMGF PHSQICTPEF SSSSDFHCTR  180
LLTGTGNAFS LGSAFSAGGF DGFDGLGNAM FMNRAKILNT LEVFPSQPTL FQKRAAMRQG  240
SVGADKLGNL DVSGLRLGGE VSHGKRKRHE EGEIEEASID VSGLNYDFDE TNDDCKVDES  300
VNNGGCNSNT TSTVTGGVDQ GKKKGMPAKN LMAERRRRKK LNDRLYMLRS VVPKISKMDR  360
ASILGDAIDY LKELLQRIND LHTELEATPP GSLMPPSTSF HPLTPTPSTL PCGVKEELCP  420
SSLPSPKSQP AKVEVRVREG RAVNIHMFCA RRPGVLLSTM RALDNLGLDI QQAVISCFNG  480
FALDVFQAEQ CREGQDVLPE QIKAVLLDSA GFDGIM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	340	KKKGMPAKNLMAERRRRKK
2	334	341	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-155	bHLH family protein