PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739935.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 388aa    MW: 42240.3 Da    PI: 8.3022
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.34.2e-066485426
                    ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                      C++++  G+C +Gd+C ++H+
  XP_022739935.1 64 TVCKYWMS-GHCTRGDKCWYSHS 85
                    57******.**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEIKGVDRGR NLCGNKGDFT NPNGNVFRRN TMVSRALIGD PPTKISTFCP KNSSVWTLKP  60
QEKTVCKYWM SGHCTRGDKC WYSHSWSLGG GFAMLAKLEG HKKAVQGVAL PSGSDKLYSG  120
SSDGTARIWD CNTGKCVQLI KLGNEVGCLI TEGPWVFIGM KNVVKALNIH TANEFNLKGP  180
VGQVYAMVVA SDMLFAGAQN GAIIVWRGSS KASSFQAAAS LEGHTGAVLC LAVGEKKLFS  240
GSADQTIRVW DTDTLHCIKS LNGHADAVMS LLYCNGCLFS CSLDCTVKVW FAKEGQNWEV  300
IYSHNEENGV LTLCGMNDAE TKPVLFCSCN DNTVRLYELP SFSERGRLFS KQEVRVIERG  360
PDGLFFTGDA TGSLTVWRWL QKPQGGAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51980.11e-137C3H family protein