PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739846.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 276aa MW: 31540 Da PI: 4.4085

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.9	4.9e-20	65	118	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t eq++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k XP_022739846.1 65 KKRRLTLEQVHLLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 118 56689************************************************9 PP
2	HD-ZIP_I/II	129.5	1.3e-41	64	156	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv+lLE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE +y+ Lk++yd+l+++ +++ ke+e+L++e+++ XP_022739846.1 64 EKKRRLTLEQVHLLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLEIKYDLLKASYDSLQSNYDSIVKENEKLKSEVAS 156 69**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MEAGRLFFNP SACHGNMLFL GDNEPIFRGA RTMTSMEEIS RRRTFFSSPE DLYDEEYYDE 60 QLPEKKRRLT LEQVHLLEKS FEEENKLEPE RKSQLAKKLG LQPRQVAVWF QNRRARWKTK 120 QLEIKYDLLK ASYDSLQSNY DSIVKENEKL KSEVASLTEK LQAEDVATGP LMTGPMAEPL 180 AAEMVSSIQF FLKVEDRQST GSAGSAVVDE DAPHLVDSGD SYFPSEEYPG CVGPVNGVQS 240 EEDDGSDDGR SYFSNVFTAT EQQQQHEEPL GWWVWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	121	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	5e-95	HD-ZIP family protein