PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739360.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 818aa MW: 94276.4 Da PI: 6.7437

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.5	1.1e-23	138	225	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA GFs+rk+ +ks+ ng +++r+++C+++g+r +++++ + r++r+etrtgC a++++ ++ +gk++vt++e+ HnHe++ XP_022739360.1 138 KYYGRYAVLEGFSIRKDFVNKSRVNGAVVSRRYTCYRQGYRPSKHNS--NVRKPRQETRTGCLAHMTIARQPNGKFRVTNFETRHNHEFV 225 69**************************************99988..99***********************************86 PP
2	FAR1	89.5	4.7e-28	273	361	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk++ ++sk +g + +r+f+C +eg+r+++k++ + +r+r+etr+gC a+l++ +++dgk++vt++e++HnHel+ XP_022739360.1 273 EFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRD-LNIKRPRKETRIGCLAQLVICRQSDGKYRVTHFEEKHNHELV 361 6*****************************************999.999***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MDRSDPDILT HGQNLGIHNE LQESNQVDID VDQEYKSLEP SAAEKSQEAA ESESCSQSPN 60 ASSVEKSDVE INGAECLAPQ VPLVNKCEMD VDGEQESQSP NPLSIDALGS RVSFKDEEDI 120 FVVPAVGVEF ESEEHAYKYY GRYAVLEGFS IRKDFVNKSR VNGAVVSRRY TCYRQGYRPS 180 KHNSNVRKPR QETRTGCLAH MTIARQPNGK FRVTNFETRH NHEFVNPSTA HLLPSQKRLT 240 FAEAVEADLA SSSGRDGVPK LGMAFESEDH AYEFYNTYAG RVGFSVRKDY VNRSKIDGAV 300 ASRRFTCFRE GFRQKDKRDL NIKRPRKETR IGCLAQLVIC RQSDGKYRVT HFEEKHNHEL 360 VAPCRVRMLR SQKHLAAPQV AEGNALEGYK IQEESACEVS CNSIGDCVDH GYDPIDLRSK 420 LSSKRSREMR EGEAERIQQH FQSKKMKNPS FFYAMQLDAE NQIANIFWAD AKMVMDYSDF 480 GDVLCFDTTY RLHKDCRLFS PFVGVNHHKQ MVIFGAALLY DETVDSFKWL FQKFLEAMSG 540 KKPKTILTDQ DAIVSEAINS VFPDINQRMC VWHVYQSALK QLSHLFVGSL SFVNDLSSCF 600 FDHEEEEDFI AAWNLMLDVH GLWDNEWLNK IFESREQWAI AYKRHIFSAD LKSAQLRESF 660 IVTLKKYLKP ESDVLSFFKH LGKGVNDWHY KELEANYDMR QNMPKLMGDV ILLKHARDAY 720 TPRIFELFQQ EYETCLNIVV NQCVESEKLF EYKVSIYGQP REYSVSYNLS DNTVFCSCKK 780 FEFMGVLCSH ALKVLDYRNI RLLPSHYILK RWTRDARA

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MDRSDPDILT HGQNLGIHNE LQESNQVDID VDQEYKSLEP SAAEKSQEAA ESESCSQSPN  60
ASSVEKSDVE INGAECLAPQ VPLVNKCEMD VDGEQESQSP NPLSIDALGS RVSFKDEEDI  120
FVVPAVGVEF ESEEHAYKYY GRYAVLEGFS IRKDFVNKSR VNGAVVSRRY TCYRQGYRPS  180
KHNSNVRKPR QETRTGCLAH MTIARQPNGK FRVTNFETRH NHEFVNPSTA HLLPSQKRLT  240
FAEAVEADLA SSSGRDGVPK LGMAFESEDH AYEFYNTYAG RVGFSVRKDY VNRSKIDGAV  300
ASRRFTCFRE GFRQKDKRDL NIKRPRKETR IGCLAQLVIC RQSDGKYRVT HFEEKHNHEL  360
VAPCRVRMLR SQKHLAAPQV AEGNALEGYK IQEESACEVS CNSIGDCVDH GYDPIDLRSK  420
LSSKRSREMR EGEAERIQQH FQSKKMKNPS FFYAMQLDAE NQIANIFWAD AKMVMDYSDF  480
GDVLCFDTTY RLHKDCRLFS PFVGVNHHKQ MVIFGAALLY DETVDSFKWL FQKFLEAMSG  540
KKPKTILTDQ DAIVSEAINS VFPDINQRMC VWHVYQSALK QLSHLFVGSL SFVNDLSSCF  600
FDHEEEEDFI AAWNLMLDVH GLWDNEWLNK IFESREQWAI AYKRHIFSAD LKSAQLRESF  660
IVTLKKYLKP ESDVLSFFKH LGKGVNDWHY KELEANYDMR QNMPKLMGDV ILLKHARDAY  720
TPRIFELFQQ EYETCLNIVV NQCVESEKLF EYKVSIYGQP REYSVSYNLS DNTVFCSCKK  780
FEFMGVLCSH ALKVLDYRNI RLLPSHYILK RWTRDARA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-124	FAR1 family protein