PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738632.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 962aa MW: 109250 Da PI: 7.2287

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.3	3.9e-26	181	266	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 kfY++YA+ +GFsvrk k ++s ng+i kr+f Cs+eg+r ++ ++ + r +r+etrtgCka+++++ e ++kw++++l+leHnH+l XP_022738632.1 181 KFYKDYANAIGFSVRKGKYQRS-LNGTIRKRNFLCSNEGFRLNKPNS-NAVRYRRKETRTGCKAMVQITSE-NEKWMISHLVLEHNHNL 266 6**************99998.8999************9999.99999*************9.*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 962 aa Download sequence
MADEVDSTSA TGFSLSDELA LENCYLGFGL MENQDDHVPF PLLSPNNNQE AHQPMSFDRE 60 YSNNGGGVHG SSDGWSAVSG ALSFTTTYGP ELDEQQLTLP WITEKAITHQ QHSQKMDNSV 120 KHHLSCGTHS SSLDSDGYDT ASSESIRDEM LQQSKMKINH EISVQAPELG MEFSSEDDAY 180 KFYKDYANAI GFSVRKGKYQ RSLNGTIRKR NFLCSNEGFR LNKPNSNAVR YRRKETRTGC 240 KAMVQITSEN EKWMISHLVL EHNHNLEGSS QRYIGSRPHN SQTSEDHLTN RTIRKTAMVQ 300 KAGDSISAKF CNVDYSSYLG YQNVSSLNPE DAQGLINYLK QLQLDDPSFF YTLQVDAKSS 360 LTNFFWRDGR SKLDYQYFGD VIVLDTTFRV GLQRMICAPF LGLNHHRQYV LLGCALLLDE 420 SKDSFRWLFG TLMAAMGGHQ PKTILTTECQ AMADAIKEVL PDTQHHLGMW YIQQTAAQHL 480 SELYQQSGFK NLFNKCIFDC QYEEEFDLLW NSLVEQYNLR ENEFLKTLHV LRKKWSPVFS 540 KSTFFAGIQS TDDCKTIRTV FQSLMRENMT LSKFAQQYQM VAKEQRKNEL DEDLCCNKTS 600 PLTILKGSTL EKQAADVYTR TMFKLFQEEL RGCLSVAIED MGFTGTVATF KLKEEAQKDH 660 IVKFDDSLNQ ITCGCKKYES VGILCVHILK VLNAKNIFQL PFRYILKRWM KSAKDGKVLN 720 DHIGAAERSE KSLKVSKLEQ KALNVITKSV ASEDSYKIVE DCLDIVLGKV ENVLKTKHTG 780 HQDKEKDVEI LNTCNEGIET QTVLSAPPFQ KEAADHRLRS KSKRKHEDDV SEINCKSMDD 840 CVLHRQPPRK ATKGTDNEGS RAISSHSYFA GDCSQQPACI SPRPPLPSPS TIHQFKGFSK 900 PMGILQERKK QAPDAPVSRR EMETMEMTIM SKMKEMHEGI TKMKGMHEAI LRAINENKKS 960 LP

Sequence ? help Back to Top

Protein Sequence Length: 962 aa Download sequence

MADEVDSTSA TGFSLSDELA LENCYLGFGL MENQDDHVPF PLLSPNNNQE AHQPMSFDRE  60
YSNNGGGVHG SSDGWSAVSG ALSFTTTYGP ELDEQQLTLP WITEKAITHQ QHSQKMDNSV  120
KHHLSCGTHS SSLDSDGYDT ASSESIRDEM LQQSKMKINH EISVQAPELG MEFSSEDDAY  180
KFYKDYANAI GFSVRKGKYQ RSLNGTIRKR NFLCSNEGFR LNKPNSNAVR YRRKETRTGC  240
KAMVQITSEN EKWMISHLVL EHNHNLEGSS QRYIGSRPHN SQTSEDHLTN RTIRKTAMVQ  300
KAGDSISAKF CNVDYSSYLG YQNVSSLNPE DAQGLINYLK QLQLDDPSFF YTLQVDAKSS  360
LTNFFWRDGR SKLDYQYFGD VIVLDTTFRV GLQRMICAPF LGLNHHRQYV LLGCALLLDE  420
SKDSFRWLFG TLMAAMGGHQ PKTILTTECQ AMADAIKEVL PDTQHHLGMW YIQQTAAQHL  480
SELYQQSGFK NLFNKCIFDC QYEEEFDLLW NSLVEQYNLR ENEFLKTLHV LRKKWSPVFS  540
KSTFFAGIQS TDDCKTIRTV FQSLMRENMT LSKFAQQYQM VAKEQRKNEL DEDLCCNKTS  600
PLTILKGSTL EKQAADVYTR TMFKLFQEEL RGCLSVAIED MGFTGTVATF KLKEEAQKDH  660
IVKFDDSLNQ ITCGCKKYES VGILCVHILK VLNAKNIFQL PFRYILKRWM KSAKDGKVLN  720
DHIGAAERSE KSLKVSKLEQ KALNVITKSV ASEDSYKIVE DCLDIVLGKV ENVLKTKHTG  780
HQDKEKDVEI LNTCNEGIET QTVLSAPPFQ KEAADHRLRS KSKRKHEDDV SEINCKSMDD  840
CVLHRQPPRK ATKGTDNEGS RAISSHSYFA GDCSQQPACI SPRPPLPSPS TIHQFKGFSK  900
PMGILQERKK QAPDAPVSRR EMETMEMTIM SKMKEMHEGI TKMKGMHEAI LRAINENKKS  960
LP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein