PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738380.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 695aa MW: 78230.4 Da PI: 7.1016

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.3	3.4e-24	132	232	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+kvlt sd++++g +++ +k+a+e+ +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + ++ XP_022738380.1 132 FCKVLTASDTSTHGGFSVLRKHATEClppldMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGANG 224 99**************************9555556679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_022738380.1 225 ELHVGVRR 232 99**98 PP
2	Auxin_resp	105	9.1e-35	258	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F v Y+Pr+ s+F+++++k+++al++k++vGmRf+m+fe+eds+err+sGt++gv+d++p +W++S WrsLk XP_022738380.1 258 ASHAVSTQTLFVVHYKPRT--SQFIIRLNKYLEALNNKFTVGMRFRMRFEGEDSPERRFSGTIAGVEDFSP-HWKDSTWRSLK 337 789*************6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MMANRGRSFS QTINVSSEVI GNGGDDLNME LWKLCAGPLV DVPRAEDRVY YFPQGHMEQL 60 EALTYQELNQ RIPLFNLQPK ILCRVVHIQL LAEQETDEVY AQITLLPEPN QPEPTTPDPC 120 PPESQRSTVH SFCKVLTASD TSTHGGFSVL RKHATECLPP LDMNQATPTQ ELVAKDLHGY 180 EWRFKHIFRG QPRRHLLTTG WSTFVTSKRL VAGDSFVFLR GANGELHVGV RRVARQQSSM 240 PSSVISSQSM HLGVLATASH AVSTQTLFVV HYKPRTSQFI IRLNKYLEAL NNKFTVGMRF 300 RMRFEGEDSP ERRFSGTIAG VEDFSPHWKD STWRSLKVQW DEPSSIPRPD RVSPWEIEPF 360 AQPIPPTLAQ PVVTKYKRPR PPNEIPALAS APWNTEVTHS PDLAWRNITP EGKRNENHVI 420 WHHLQTEMNS SCSSVSKTQN ERSRLSSPGM SVYPLMFPEA REDNKSVRGW PVHSGFSNPQ 480 INNVSTFDPI EKVKKSETAA SCRLFGIELI NHSASSTHLE RTPTQLSTMT TGTTEGHGLS 540 TLSPIDSDQK SDISKDSKEK MQEQLQLSAK EIQSRQSCSS STRSCTKVQM QGVAIGRAVD 600 LGMLEGYDQL IDELERLFHI KGELRPRNKW EIVYTDDEGD MMLVGDDPWL EFCNMVRRIF 660 ICSSQDGKKM STGSKLPLAS IEGQGTVISS YSAEN

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MMANRGRSFS QTINVSSEVI GNGGDDLNME LWKLCAGPLV DVPRAEDRVY YFPQGHMEQL  60
EALTYQELNQ RIPLFNLQPK ILCRVVHIQL LAEQETDEVY AQITLLPEPN QPEPTTPDPC  120
PPESQRSTVH SFCKVLTASD TSTHGGFSVL RKHATECLPP LDMNQATPTQ ELVAKDLHGY  180
EWRFKHIFRG QPRRHLLTTG WSTFVTSKRL VAGDSFVFLR GANGELHVGV RRVARQQSSM  240
PSSVISSQSM HLGVLATASH AVSTQTLFVV HYKPRTSQFI IRLNKYLEAL NNKFTVGMRF  300
RMRFEGEDSP ERRFSGTIAG VEDFSPHWKD STWRSLKVQW DEPSSIPRPD RVSPWEIEPF  360
AQPIPPTLAQ PVVTKYKRPR PPNEIPALAS APWNTEVTHS PDLAWRNITP EGKRNENHVI  420
WHHLQTEMNS SCSSVSKTQN ERSRLSSPGM SVYPLMFPEA REDNKSVRGW PVHSGFSNPQ  480
INNVSTFDPI EKVKKSETAA SCRLFGIELI NHSASSTHLE RTPTQLSTMT TGTTEGHGLS  540
TLSPIDSDQK SDISKDSKEK MQEQLQLSAK EIQSRQSCSS STRSCTKVQM QGVAIGRAVD  600
LGMLEGYDQL IDELERLFHI KGELRPRNKW EIVYTDDEGD MMLVGDDPWL EFCNMVRRIF  660
ICSSQDGKKM STGSKLPLAS IEGQGTVISS YSAEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	377	381	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein