PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737711.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 564aa MW: 61384.1 Da PI: 8.0201

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.6	2e-17	264	313	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR +iN++f+ Lr+l+P++ +K +Ka+ L ++veYI+ Lq XP_022737711.1 264 RSKHSATEQRRRCKINDRFQMLRSLIPHS----EQKRDKASFLLEVVEYIQFLQ 313 899***********************8....7*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MELPQSRPLG AEGRKPTHDF LSLYSHSSVQ QDPNRSSQGG YLKTHDFLQI ERLGKTSAKE 60 EIPVEVATSE KPPPQAPPSS VEHILPGGIG TYSISHISYF NPRVPKAEGA VFSVAQGIST 120 ERNEENSNCS SYTGSGFTLW EESAGKKGKT GKENGGETPV VREAAGKVGQ WAMSSLERAS 180 QLSTNNHRNT FSSFSSSQPS SKQKSQSFME MIKSAKGSSQ DDDFEEDDDF VLKKESPTTT 240 NSKGELRVKV DGKSAPDQKA NTSRSKHSAT EQRRRCKIND RFQMLRSLIP HSEQKRDKAS 300 FLLEVVEYIQ FLQEKVQKYE GTYQGWSQDP STLMPWRNNH RLTENYADQS RAINGVSAPA 360 LAFSGKFDEK NISITPTIPG SPQNPIESDM SIATTFRAID PRSGMMNKTM PFPVSIQPNP 420 LTSAHGTGAA AQLPSGLPSD SENSASQPQS VPYHTGSCTT NGALPTEKLK EKELTIEGGT 480 ISISSVYSQG LLNTLTQVLQ TSGVDLSNAS ISVQIELGKQ SSSRSAAPTS TLKDREALST 540 HQGAMRSRVG CNEDSDQPLK KLKT

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MELPQSRPLG AEGRKPTHDF LSLYSHSSVQ QDPNRSSQGG YLKTHDFLQI ERLGKTSAKE  60
EIPVEVATSE KPPPQAPPSS VEHILPGGIG TYSISHISYF NPRVPKAEGA VFSVAQGIST  120
ERNEENSNCS SYTGSGFTLW EESAGKKGKT GKENGGETPV VREAAGKVGQ WAMSSLERAS  180
QLSTNNHRNT FSSFSSSQPS SKQKSQSFME MIKSAKGSSQ DDDFEEDDDF VLKKESPTTT  240
NSKGELRVKV DGKSAPDQKA NTSRSKHSAT EQRRRCKIND RFQMLRSLIP HSEQKRDKAS  300
FLLEVVEYIQ FLQEKVQKYE GTYQGWSQDP STLMPWRNNH RLTENYADQS RAINGVSAPA  360
LAFSGKFDEK NISITPTIPG SPQNPIESDM SIATTFRAID PRSGMMNKTM PFPVSIQPNP  420
LTSAHGTGAA AQLPSGLPSD SENSASQPQS VPYHTGSCTT NGALPTEKLK EKELTIEGGT  480
ISISSVYSQG LLNTLTQVLQ TSGVDLSNAS ISVQIELGKQ SSSRSAAPTS TLKDREALST  540
HQGAMRSRVG CNEDSDQPLK KLKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-113	bHLH family protein