PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736464.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 671aa    MW: 74899.3 Da    PI: 6.1011
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS419.23.6e-1282896561374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lL++c+ea+ s++ +++++++a+l +lasp+ +++ Rl+ay+teALa r++r +++++++ +p+e + + ++++ +al+l+++vsPi+kf h
  XP_022736464.1 289 LVHLLTACVEAIGSKNIAAINHFIAKLGDLASPRESAISRLTAYYTEALALRVTRLWPHIFHITTPRELD-RVVDDNGTALRLLNQVSPIPKFVH 382
                     68**************************************************************999997.78999******************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +t N+ +l+a+eg++rvHiiDfdi+qGlQWp+++q+L sR+++p ++R+Tg+g+    sk+el+etg rLa fAe+l++pfef++ v++rled++
  XP_022736464.1 383 FTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSFFQSLVSRANPPSHVRVTGIGE----SKQELNETGGRLAGFAESLNLPFEFHA-VVDRLEDVR 472
                     ******************************************************....***************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l++L+vk++E++aVn+v+q+h++l +    +   +++L l++s++P+vv+++eqea+hn  s+ +r++++l+yysa+fds++++lp es  rik+
  XP_022736464.1 473 LWMLHVKEKESVAVNCVFQMHKTLYDGNGGA--LRDFLGLIRSTNPTVVIMAEQEAEHNVLSLEARVTNSLRYYSAIFDSIDSSLPLESPVRIKI 565
                     ************************6554444..589*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee..sgslv.lgWkdrpLvsvSaWr 374
                     E++ ++rei+n++aceg++r+erhe++ekW   +e+ GF+ + +se++  q ++ll++++ + y+v+++  +g+++ l W d+pL+svSaW+
  XP_022736464.1 566 EEF-FAREIRNIIACEGSDRFERHESFEKWGTLMEQGGFRCMGISERELLQSQMLLKMYSCENYKVKKQgqDGWALtLSWLDQPLYSVSAWT 656
                     ***.********************************************************999****7655777666**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    
MLAGCSSSTL LSPRHRLRSE VSAQFQACHF QTSMSTQRLD LPCSFSRKDT SRSQPIRPVG  60
LSVEKPIESK TSGCSLKQNI RLPPLTTSAQ NPFEGRREIK DEFWEKGKSL KRFAEHGLID  120
ESVINRAKRK KGSSDNENSG DIHEGGGDNL SLSQLGGGNF WFQRSFTGQN APQVPFSLNC  180
SGDEERVCFV PFEVISPPLP LSNNPWIESV ITEITDVGEK DVETIHRPEK EASGSSTSSE  240
SHSLGLRLNE QATEPEVGNG SGNPYPQEGA SLAAYEKENN HGEHQGFELV HLLTACVEAI  300
GSKNIAAINH FIAKLGDLAS PRESAISRLT AYYTEALALR VTRLWPHIFH ITTPRELDRV  360
VDDNGTALRL LNQVSPIPKF VHFTSNEILL RAFEGKDRVH IIDFDIKQGL QWPSFFQSLV  420
SRANPPSHVR VTGIGESKQE LNETGGRLAG FAESLNLPFE FHAVVDRLED VRLWMLHVKE  480
KESVAVNCVF QMHKTLYDGN GGALRDFLGL IRSTNPTVVI MAEQEAEHNV LSLEARVTNS  540
LRYYSAIFDS IDSSLPLESP VRIKIEEFFA REIRNIIACE GSDRFERHES FEKWGTLMEQ  600
GGFRCMGISE RELLQSQMLL KMYSCENYKV KKQGQDGWAL TLSWLDQPLY SVSAWTPIDV  660
AGSSSSFFQP G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein