PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736391.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 766aa MW: 83852.1 Da PI: 5.4115

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.2	6.2e-30	95	179	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ +r++ k+plWe+vs+k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f+qlea XP_022736391.1 95 RWPRQETLALLKIRSDMDAVFRDATVKGPLWEDVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YKFFSQLEA 179 8*******************************************************************866665..*****85 PP
2	trihelix	103.3	1.8e-32	506	590	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k evlaLi++r+ +e++++++ k+p Wee+s m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf+ql+ XP_022736391.1 506 RWPKAEVLALINLRSGLETTYQEAGPKGPFWEEISTGMFRMGYRRSAKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHQLD 590 8*******************************************************************8.99999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MQQGGGGGGG GGGGHQSQDE EMGAPTTGAV SSSHMVSEQS EQLVEAASPI SSRPPATGNL 60 DEFIRFASGG GDEGGDEGDR AGGGGGAAGV SSGNRWPRQE TLALLKIRSD MDAVFRDATV 120 KGPLWEDVSR KLAELGYKRS AKKCKEKFEN VHKYYKRTKE GRAGRQDGKS YKFFSQLEAL 180 HTTSPTVAAN VSTPMIIVTA TTAASLDVAP VSVGIPMPIS SVRIPPTAAI RMSSSVLPMP 240 PAQVPPPITT TAAPFGISFS SNSSSSSEGF EDDDDGEDEV GGEPSSMAGT SRKRKRQSSR 300 GGGSTTRRMM EFFEVLMKQV MQKQEAMQQR FLEAIERREQ DRMIREEAWK RQEMARLTHE 360 HELMAQERAI AASRDAAIIS FLEKITGQTI WLPTTVTIPA APPPLTQPAV PVVPPIAPIP 420 AATPPSHQPP SLPQQQQRNS QPQQLQQSQS HYQHRQQQQQ QQPQNTEVLR HHQQPISSEV 480 LIAIPEQQVP PQEIGGSASL EPASSRWPKA EVLALINLRS GLETTYQEAG PKGPFWEEIS 540 TGMFRMGYRR SAKRCKEKWE NINKYFKKVK ESNKKRPEDA KTCPYFHQLD FLYREKILGG 600 GTSGGSSSFG DRNRPEEETS QQHQETSDAP PIMAAPQLTQ PTDQSEDKTG ADVVTSKEHL 660 PGSLFGEGNG GAAKKPEDIV RELMEERGMH RQQHHQGQSL LVDGYDRIDE PDSDNMDHDE 720 DEDEDEDGDE LEEERKIAYK IEFQRQNAST PNGGGNGAPS FLAMVQ

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MQQGGGGGGG GGGGHQSQDE EMGAPTTGAV SSSHMVSEQS EQLVEAASPI SSRPPATGNL  60
DEFIRFASGG GDEGGDEGDR AGGGGGAAGV SSGNRWPRQE TLALLKIRSD MDAVFRDATV  120
KGPLWEDVSR KLAELGYKRS AKKCKEKFEN VHKYYKRTKE GRAGRQDGKS YKFFSQLEAL  180
HTTSPTVAAN VSTPMIIVTA TTAASLDVAP VSVGIPMPIS SVRIPPTAAI RMSSSVLPMP  240
PAQVPPPITT TAAPFGISFS SNSSSSSEGF EDDDDGEDEV GGEPSSMAGT SRKRKRQSSR  300
GGGSTTRRMM EFFEVLMKQV MQKQEAMQQR FLEAIERREQ DRMIREEAWK RQEMARLTHE  360
HELMAQERAI AASRDAAIIS FLEKITGQTI WLPTTVTIPA APPPLTQPAV PVVPPIAPIP  420
AATPPSHQPP SLPQQQQRNS QPQQLQQSQS HYQHRQQQQQ QQPQNTEVLR HHQQPISSEV  480
LIAIPEQQVP PQEIGGSASL EPASSRWPKA EVLALINLRS GLETTYQEAG PKGPFWEEIS  540
TGMFRMGYRR SAKRCKEKWE NINKYFKKVK ESNKKRPEDA KTCPYFHQLD FLYREKILGG  600
GTSGGSSSFG DRNRPEEETS QQHQETSDAP PIMAAPQLTQ PTDQSEDKTG ADVVTSKEHL  660
PGSLFGEGNG GAAKKPEDIV RELMEERGMH RQQHHQGQSL LVDGYDRIDE PDSDNMDHDE  720
DEDEDEDGDE LEEERKIAYK IEFQRQNAST PNGGGNGAPS FLAMVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	146	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	3e-54	Trihelix family protein