PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735291.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 528aa    MW: 59019.7 Da    PI: 4.5974
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS357.81.6e-1091515211374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetsekn..sseelaalklfsevsPil 91 
                     lv+lLl+cAeav  +d +la+++L ++   a+p gd++qR+  +f+ +L++rl+   +v++   + ++  +++     +e++ a++l+++++P++
  XP_022735291.1 151 LVHLLLACAEAVGCRDIQLATSMLGQIWASATPWGDSLQRVSYCFATGLKSRLSLlqNVNGNGTIANCAFDAP-LiaREEKMEAFQLLYQATPYI 244
                     68**************************************************987312333333334433333.24699999************* PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.r 185
                      f++++aN+aI +a++g++ +HiiD+++++ lQWp+L+++LasRpegpp+lRiT++ s +  +  ele+  + L + A +lg+ +ef++++++ +
  XP_022735291.1 245 AFGFMAANEAICQAAQGKDSLHIIDLGMEHTLQWPSLIRTLASRPEGPPTLRITALTSDQ--DLLELEAGMKSLVQDALSLGIALEFHMIAETvT 337
                     **********************************************************55..99*************************865568 PP

            GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      + l+ e+L+++++Eal +n+v++lh+ ++es  + +   ++L+++++l P ++++veq+a+hn++ Fl rfle+l+yysa+fdslea+lpr+s 
  XP_022735291.1 338 PSLLTRENLNLREREALFINSVMHLHKYVKESRGSLK---AILQAIRKLGPALLTMVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRNSP 429
                     8999*************************88776666...9****************************************************** PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +r+k+Er  +++ei+n+va eg++r+erhe++ +Wr++l++aGF+ + l+    +qa+++l+ ++ dgy++ +e+g l+lgWk+rp++ +SaW+
  XP_022735291.1 430 QRTKIERLHFAEEIRNIVAYEGSDRTERHERADQWRRQLGRAGFQVMGLK--CLSQARMMLSVYGCDGYTLASERGFLLLGWKGRPIMLASAWQ 521
                     **********************************************9985..89***************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MEGINGWLSF PLYESFNHDF AIRRFCPARV ELEQVELEEA MNYEVESFSP DDGTSTPHLA  60
ASEVDDFVDS FINMDDDGDD KDDHNSRKQQ IFHLQDEIEA FSVVNDDFGD ASMMIEGDEL  120
EMCGSCEDFG VHEMVPSVEE ASHGVDQGLH LVHLLLACAE AVGCRDIQLA TSMLGQIWAS  180
ATPWGDSLQR VSYCFATGLK SRLSLLQNVN GNGTIANCAF DAPLIAREEK MEAFQLLYQA  240
TPYIAFGFMA ANEAICQAAQ GKDSLHIIDL GMEHTLQWPS LIRTLASRPE GPPTLRITAL  300
TSDQDLLELE AGMKSLVQDA LSLGIALEFH MIAETVTPSL LTRENLNLRE REALFINSVM  360
HLHKYVKESR GSLKAILQAI RKLGPALLTM VEQDANHNGP FFLGRFLESL HYYSAIFDSL  420
EASLPRNSPQ RTKIERLHFA EEIRNIVAYE GSDRTERHER ADQWRRQLGR AGFQVMGLKC  480
LSQARMMLSV YGCDGYTLAS ERGFLLLGWK GRPIMLASAW QLHNASSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-75GRAS family protein