PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735258.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 615aa    MW: 67487.3 Da    PI: 5.4498
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735258.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.92.1e-1382466051374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++l+la+al++++  la +++ +m+++a+yf+eALa+r++r        l p++  +++ s++l+++  f+e++P+lkf+h
  XP_022735258.1 246 LVHALMACAEAVQQNKLNLAEALVKQIGFLAISQAGAMRKVATYFAEALARRIYR--------LYPRNPIDQSLSDVLHMH--FYETCPYLKFAH 330
                     689****************************************************........445555555689998885..************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+eg++rvH+iDf+++qG+QWpaL+qaLa R +gpp + +Tg+g+p++++++ l+e+g++La++Ae+++v+fe++ +va++l+dl+
  XP_022735258.1 331 FTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRVGGPPAFMLTGIGPPTHDNSDHLKEVGWKLAQLAETIHVEFEYRRVVANSLADLD 425
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                      ++L+++p   Ea+aVn+v++lh+ll++++++++    vL++vk+++P++v++veqea+hn++ Fl+rf+e+l+yys+lfdsle ++   s +++
  XP_022735258.1 426 ASMLDLRPgeVEAVAVNSVFELHKLLAQPGAIDK----VLSVVKQMKPEIVTIVEQEANHNGPIFLDRFTESLHYYSTLFDSLEGSV---STQDN 513
                     ********77789*************99999999....************************************************7...999** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++++lg++i+nvvaceg +r+erhetl +Wr+rl++aGF pv+l+++a kqa++ll+ ++ +dgy vee++g+l+lgW++r+L+++SaW+
  XP_022735258.1 514 VMSEVYLGKQICNVVACEGVDRVERHETLTQWRNRLSSAGFAPVHLGSNAFKQASMLLALFAgGDGYGVEENNGCLMLGWHKRSLIATSAWK 605
                     *******************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    
MKRDQYHLQP NPDPSNVGSF SVCGGSTNGK AKMWEEEAAQ QDCGMDELLA VLGYKVKTSD  60
MADVAQKIEQ LEEVMCNVED DGISQLASET VHYNPSDLST WLESMISELN PPSTFDPVVA  120
ARTTAAASAI LDDSFLGPAE SSTLTTLDFN NNQKHQKRGQ QIFEEASCSD YDLKAIPGKA  180
IYSQKTQTHD SSSSSSTQNN IKSEKRLKST SGSHSDILAP AASYGIPTES SLPVVLVDSQ  240
ENGIRLVHAL MACAEAVQQN KLNLAEALVK QIGFLAISQA GAMRKVATYF AEALARRIYR  300
LYPRNPIDQS LSDVLHMHFY ETCPYLKFAH FTANQAILEA FEGKKRVHVI DFSMNQGMQW  360
PALMQALALR VGGPPAFMLT GIGPPTHDNS DHLKEVGWKL AQLAETIHVE FEYRRVVANS  420
LADLDASMLD LRPGEVEAVA VNSVFELHKL LAQPGAIDKV LSVVKQMKPE IVTIVEQEAN  480
HNGPIFLDRF TESLHYYSTL FDSLEGSVST QDNVMSEVYL GKQICNVVAC EGVDRVERHE  540
TLTQWRNRLS SAGFAPVHLG SNAFKQASML LALFAGGDGY GVEENNGCLM LGWHKRSLIA  600
TSAWKLANKT TAISH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein