PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735013.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 692aa MW: 79958.9 Da PI: 6.5921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.8	4.3e-24	71	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+v+++++ HnHel XP_022735013.1 71 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgVTQWYVSQFSNVHNHELL 162 69******************8888.**************************************998766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MTMKPSNNIW IRRQQCACGD WKCYVKFEGD DQTSVSSQLI KNETASTSSS SEAVFMPYVG 60 QIFKSDDDAF EYYSNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGFN QPRKKANVEH 120 PRDRKSVRCG CDAKLYLTKE IVDGVTQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEAD 180 QERILLLSKA GFPVNRIVKV LELERGVQPG QLPFIEKDVR NFVRTCKKTV QENDALLTEK 240 RENDTLELLE ACKAMAERDA NFVYDYTTDE NNKVENISWS YADSVRAYTV FGDAVTFDTT 300 YRSITYGLLL GVWFGIDNHG KPIFLGCVLL QDESSNSFAW ALQTFLRFMR GRCPQTILTD 360 IDSCLRDAIA RELPNTKHVI CSWHVLSKLS SWFSLPLGPQ YEEFKAQFDM LFHLEGIEEF 420 EHQWNILVAR FGLASDKHIA LLFSFRTSWP LSYIRGCFLA RSMTAEFSQS LDAFLKRILS 480 GQTCLQLFFE QVGVAADLRN QSRERVQYMH IKTCLPIEEN ARSILTPYAF NALQHEIVLS 540 MQYATTEMAN GSYLVRHYKK MDGEYLVIWI PQDEQIHCSC KEFEHSGTLC RHCLRVLIVK 600 NYFEIPEKYV LFRWRLESSL VPGEDQNGQC SSDECAQAFH SLAATLLTES LFSKERFNHV 660 HRELTKLLDQ VRDMPVCNEF ALNMAANNIS ES

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MTMKPSNNIW IRRQQCACGD WKCYVKFEGD DQTSVSSQLI KNETASTSSS SEAVFMPYVG  60
QIFKSDDDAF EYYSNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGFN QPRKKANVEH  120
PRDRKSVRCG CDAKLYLTKE IVDGVTQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEAD  180
QERILLLSKA GFPVNRIVKV LELERGVQPG QLPFIEKDVR NFVRTCKKTV QENDALLTEK  240
RENDTLELLE ACKAMAERDA NFVYDYTTDE NNKVENISWS YADSVRAYTV FGDAVTFDTT  300
YRSITYGLLL GVWFGIDNHG KPIFLGCVLL QDESSNSFAW ALQTFLRFMR GRCPQTILTD  360
IDSCLRDAIA RELPNTKHVI CSWHVLSKLS SWFSLPLGPQ YEEFKAQFDM LFHLEGIEEF  420
EHQWNILVAR FGLASDKHIA LLFSFRTSWP LSYIRGCFLA RSMTAEFSQS LDAFLKRILS  480
GQTCLQLFFE QVGVAADLRN QSRERVQYMH IKTCLPIEEN ARSILTPYAF NALQHEIVLS  540
MQYATTEMAN GSYLVRHYKK MDGEYLVIWI PQDEQIHCSC KEFEHSGTLC RHCLRVLIVK  600
NYFEIPEKYV LFRWRLESSL VPGEDQNGQC SSDECAQAFH SLAATLLTES LFSKERFNHV  660
HRELTKLLDQ VRDMPVCNEF ALNMAANNIS ES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein