PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734846.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 484aa MW: 53983.1 Da PI: 6.6801

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.6e-13	307	352	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RRd++N++f Lr ++P+ +++Ka+ L Av YIk+L XP_022734846.1 307 NHVEAERQRRDKLNHRFYSLRAVVPNV-----SRMDKASLLSDAVSYIKEL 352 799*********************6.....4**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MEEQIISPSS PPSLVSFSQE TPPSTLQHRL QFVLQSQQDW WAYAIFWQTS NDDHGRLFLA 60 WADGHFQGTK DTPLKLSANY PNIPGLNNER RKVMKEIQAL VGDNNCIDMS MIDGTDNTDA 120 EWFYVMSLTR SFSVGDGIPG KALSTGSLIW LTGAHELQFY NCDRAREAQM HGIETLVCIP 180 TSRGVLELGS SEMIRENWGL VQQVKSLFGS DLIGLVQKQS IPNPNLTAAP IQFLDKNISF 240 ADIGLIAGVE EENHNNQTNS TKPGQSSYVD SKLSDSDCPL PAMKNREKRS PKKRGRKPGL 300 GRETPLNHVE AERQRRDKLN HRFYSLRAVV PNVSRMDKAS LLSDAVSYIK ELKTKIEKLE 360 SQLQRECKKV KVEMMDAMDN QSTTTSVDQA ARSSNSSSGT AGSGGLELDI KILGNDAMIR 420 FQSENVNYPA ARLMSALRDL EFLVHHASMS CVNELMIQGI VVRVPDGLRT EEGLKSALLR 480 RLEQ

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MEEQIISPSS PPSLVSFSQE TPPSTLQHRL QFVLQSQQDW WAYAIFWQTS NDDHGRLFLA  60
WADGHFQGTK DTPLKLSANY PNIPGLNNER RKVMKEIQAL VGDNNCIDMS MIDGTDNTDA  120
EWFYVMSLTR SFSVGDGIPG KALSTGSLIW LTGAHELQFY NCDRAREAQM HGIETLVCIP  180
TSRGVLELGS SEMIRENWGL VQQVKSLFGS DLIGLVQKQS IPNPNLTAAP IQFLDKNISF  240
ADIGLIAGVE EENHNNQTNS TKPGQSSYVD SKLSDSDCPL PAMKNREKRS PKKRGRKPGL  300
GRETPLNHVE AERQRRDKLN HRFYSLRAVV PNVSRMDKAS LLSDAVSYIK ELKTKIEKLE  360
SQLQRECKKV KVEMMDAMDN QSTTTSVDQA ARSSNSSSGT AGSGGLELDI KILGNDAMIR  420
FQSENVNYPA ARLMSALRDL EFLVHHASMS CVNELMIQGI VVRVPDGLRT EEGLKSALLR  480
RLEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	6e-78	bHLH family protein