PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734742.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 309aa MW: 33447 Da PI: 9.1569

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.8	5.8e-42	24	100	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCevhsk+p+v+++g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+ XP_022734742.1 24 CLVDGCTADLSKCRDYHRRHKVCEVHSKTPKVTIRGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQP 100 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MESSSSAPFK RARTPGSGNQ GPSCLVDGCT ADLSKCRDYH RRHKVCEVHS KTPKVTIRGQ 60 EQRFCQQCSR FHSLVEFDEG KRSCRKRLDG HNRRRRKPQP DSLSGRFLSN HSDSAAGTRY 120 LPFSSPQILS TTTMTTSWLG AVKVEADISS ELNFSSRNSL FPGSSSHSYK GEKQISFLQT 180 ASSSLPGFSV CQPLLDANSS SNNGGSSRKM FSVGLNQAID SSRALSLLSS QPAETQEIGL 240 SPMVQSGPAS TLSPNLQYNG LVMDAGQVGT ILAADGRSNT NLHGHEIFQT GHPGSSESGN 300 HQTLSFSWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	98	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-49	SBP family protein