PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734160.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 570aa MW: 61886.9 Da PI: 7.3098

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.3	1.3e-08	382	429	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022734160.1 382 SHSLAERVRREKISERMKFLQDLVPGC----NKVIGKAVMLDEIINYVQSLQ 429 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MEKDMVFMHE GLDRTAAEQP TWSSSSLGME MQTNELNCAI EQVGSCFFNL NWDNSMDQSD 60 RFKSALSSMV SSPAASNAGS ALPASGDNVM IRELIGRLGN ICNSGDISPQ SFIKPNNNTH 120 SSNTSYYTTP LNSPPKLSLS MMDSQIRGSL NVPGLGNQLP NHPSLAPFST DPGFAERAAR 180 FSCFSSSRNR LGLTEAEFSQ RLVPTMDSVK LSSHQSIKVT GSQANAPESN NNSQQERNFG 240 FDKKISMLTR SSSPENAEFG DSKEESSVSE QIPGGALGNS SIKSQSHANA RKRKSIPRGK 300 AKETPSTAAA EAKVAAQNDE STAKRGKQDG AAANAKEKTE QNGNSKAAND GNQKPSNENS 360 KPSEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKF LQDLVPGCNK VIGKAVMLDE 420 IINYVQSLQR QVEFLSMKLS SVNPRMDINM EALLSKDIFQ SLGSLPHALS SMDSSTPAFP 480 FRYQPQQGLP LNSGISNNIE TQFSMNPLNA ALHKTHGLQL PPIDGFTDAS PQVASIWEDD 540 LQSIVQMGFG QNQTQSYQGS KAVGQVKIEL

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MEKDMVFMHE GLDRTAAEQP TWSSSSLGME MQTNELNCAI EQVGSCFFNL NWDNSMDQSD  60
RFKSALSSMV SSPAASNAGS ALPASGDNVM IRELIGRLGN ICNSGDISPQ SFIKPNNNTH  120
SSNTSYYTTP LNSPPKLSLS MMDSQIRGSL NVPGLGNQLP NHPSLAPFST DPGFAERAAR  180
FSCFSSSRNR LGLTEAEFSQ RLVPTMDSVK LSSHQSIKVT GSQANAPESN NNSQQERNFG  240
FDKKISMLTR SSSPENAEFG DSKEESSVSE QIPGGALGNS SIKSQSHANA RKRKSIPRGK  300
AKETPSTAAA EAKVAAQNDE STAKRGKQDG AAANAKEKTE QNGNSKAAND GNQKPSNENS  360
KPSEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKF LQDLVPGCNK VIGKAVMLDE  420
IINYVQSLQR QVEFLSMKLS SVNPRMDINM EALLSKDIFQ SLGSLPHALS SMDSSTPAFP  480
FRYQPQQGLP LNSGISNNIE TQFSMNPLNA ALHKTHGLQL PPIDGFTDAS PQVASIWEDD  540
LQSIVQMGFG QNQTQSYQGS KAVGQVKIEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	5e-70	bHLH family protein