PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733749.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 266aa MW: 30037 Da PI: 7.2339

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	169.9	3e-53	85	189	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql+ fw++q i++++df+nh+lPlar+kki+kad+dv+misaeaPv+++kacelfileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdfl XP_022733749.1 85 QLQIFWANQmqeIGRTEDFRNHSLPLARVKKIMKADKDVRMISAEAPVIFAKACELFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 179 89****965566899************************************************************************** PP NF-YC 93 vdivprdelk 102 vdi+prdelk XP_022733749.1 180 VDIIPRDELK 189 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MDQSEQTQQQ QQQRQQPVMG VLPGAGQMGY STGPYQNTPM VGSGTPAVMV RSPTQPPTTF 60 SGSTHQFAYQ QAQHFHHQQQ QQQQQLQIFW ANQMQEIGRT EDFRNHSLPL ARVKKIMKAD 120 KDVRMISAEA PVIFAKACEL FILELTLRSW IHTEENKRRT LQKNDIAAAI SRTDVFDFLV 180 DIIPRDELKE EGLGVTKATI PLVGPPADIP YYYVPQHPVG PTGIMGKPID QAALYTGQQP 240 RPPMAIVPWP RDQPQQQQSQ QQQSES

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	164	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	3e-77	NF-YC family protein