PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733638.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 757aa    MW: 82813.9 Da    PI: 5.8887
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81e-1995150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_022733638.1  95 KKRYHRHTQHQIQEMEAFFKECPHPDDKRRKELGRELGLEPLQVKFWFQNKRTQMK 150
                     688999***********************************************999 PP
2START2213.9e-692784981206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W +s     +++n++e++ +f+++ +      + ea+r+++vv+m++ +lve+l+d+  qW++ +     ka+tl
  XP_022733638.1 278 ELAVAAMEELVRMAQMGEPLWITSLdgtnSMLNEEEYIGTFPRGIGpkptgVKCEASRETAVVIMNHINLVEILMDVH-QWSTVFSgivsKASTL 371
                     57899**************************************999****99**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     + +s+g      galqlm+ae+q++splvp R++++vRy++q+ +g+w++vdvS+d+ ++ p+    vR++++pSg+li++++ng+s+vtwvehv
  XP_022733638.1 372 DILSTGvagnynGALQLMTAEFQVPSPLVPtRESYYVRYCKQHAEGTWAVVDVSLDNLRSSPT----VRCRRRPSGCLIQEMPNGYSRVTWVEHV 462
                     ************************************************************996....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+ga++wvatl+rqce+
  XP_022733638.1 463 EVDDRGVHNLYKQLVSSGHAFGARRWVATLDRQCER 498
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MPAGVMIPAR NMPSMISGNG NVTGFGTSSG LILGQIMFQP NSMMEGQLHP LEMTQNTSES  60
EIARMRDEEF DSTTKSGSEN NEGASGNDQD PRPKKKRYHR HTQHQIQEME AFFKECPHPD  120
DKRRKELGRE LGLEPLQVKF WFQNKRTQMK TQHERQDNTQ LRTENEKLRL DNMRYREALS  180
TSSCPNCGGP TAVGQMSFDE HHLRLENARL REEIDRISAI AAKYVGKPML NYPLLSSPMP  240
PRPLDFGAQP GTGEMYGAGE LLRSIGAPTE ADKPMIIELA VAAMEELVRM AQMGEPLWIT  300
SLDGTNSMLN EEEYIGTFPR GIGPKPTGVK CEASRETAVV IMNHINLVEI LMDVHQWSTV  360
FSGIVSKAST LDILSTGVAG NYNGALQLMT AEFQVPSPLV PTRESYYVRY CKQHAEGTWA  420
VVDVSLDNLR SSPTVRCRRR PSGCLIQEMP NGYSRVTWVE HVEVDDRGVH NLYKQLVSSG  480
HAFGARRWVA TLDRQCERLA SVMATNIPTG DVGVITNQDG RKSMLKLAER MVISFCAGVS  540
ASTAHTWTTL SGTGADDVRV MTRKSVDDPG RPPGIVLSAA TSFWLPVSPK RVFDFLRDEN  600
SRSEWDILSN GGVVQEMAHI ANGRDTGNCV SLLRVNSANS SQSNMLILQE SCTDPTASFV  660
IYAPVDIVAM NVVLNGGDPD YVALLPSGFA ILPDGTTATA GGIADAGSGG SLLTVAFQIL  720
VDSVPTAKLS LGSVETVNNL IACTVERIKA SLSCENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein