PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732685.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 512aa MW: 57189.6 Da PI: 7.726

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.3	4.6e-17	14	69	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+ +Le+++++nr p e++++LA ++gLte+q++ WF+ rR k+k+ XP_022732685.1 14 KKRMLKTPAQIMALENFYKENRFPLDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 69 899***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MQTEENKVSL DVNKKRMLKT PAQIMALENF YKENRFPLDE MKAQLAVQIG LTEKQISSWF 60 CHRRLKDKRR DESYANGRQD HSSGVIQDHG SGLRQDSCGS IKQGDYRHID LREVESRRIY 120 GQEPLAADLT YEHRSHQNPY DAHMEDTSSE SSSSLHDQLF SESRDPYDMQ VSDKLTENGA 180 LMQINPGSSK SVGYKPSGYL KVKGQIENPA ITAVKKQLGR HYQEDGPVLG IEFDALPPGA 240 FEFLRSNPVN AASIYVGDPQ QPHSPDIYGV IKQPNLNIIN EVHNSKMSSQ DSCMEGTKFN 300 TVHGSERQER KSHHQLKYKS SVLCSNPFPG QNSLFDSNKG SSEKTAVSDC KRSGMSSKLS 360 VERMGSDSLS NHPGSYGGKI ANEQEKSWLH DNDNHTYKAP KNENLSRTSN LIHRCSEFIG 420 PERGPSARMA KVEKPGGEWK LKKGFPVRVK TDPTNELRVA KRVNVEFPLQ DFVANASHAR 480 LPLLTNPTKG SSMDVPSSFS EDETAETSSS SG

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MQTEENKVSL DVNKKRMLKT PAQIMALENF YKENRFPLDE MKAQLAVQIG LTEKQISSWF  60
CHRRLKDKRR DESYANGRQD HSSGVIQDHG SGLRQDSCGS IKQGDYRHID LREVESRRIY  120
GQEPLAADLT YEHRSHQNPY DAHMEDTSSE SSSSLHDQLF SESRDPYDMQ VSDKLTENGA  180
LMQINPGSSK SVGYKPSGYL KVKGQIENPA ITAVKKQLGR HYQEDGPVLG IEFDALPPGA  240
FEFLRSNPVN AASIYVGDPQ QPHSPDIYGV IKQPNLNIIN EVHNSKMSSQ DSCMEGTKFN  300
TVHGSERQER KSHHQLKYKS SVLCSNPFPG QNSLFDSNKG SSEKTAVSDC KRSGMSSKLS  360
VERMGSDSLS NHPGSYGGKI ANEQEKSWLH DNDNHTYKAP KNENLSRTSN LIHRCSEFIG  420
PERGPSARMA KVEKPGGEWK LKKGFPVRVK TDPTNELRVA KRVNVEFPLQ DFVANASHAR  480
LPLLTNPTKG SSMDVPSSFS EDETAETSSS SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	63	71	RRLKDKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	5e-78	HB-other family protein