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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | HB-other | ||||||||
Protein Properties | Length: 531aa MW: 59372 Da PI: 7.9012 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.3 | 4.8e-17 | 33 | 88 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+ +Le+++++nr p e++++LA ++gLte+q++ WF+ rR k+k+ XP_022732681.1 33 KKRMLKTPAQIMALENFYKENRFPLDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 88 899***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 531 aa Download sequence |
MSSVKSCKYF QQTYLNSGEM QTEENKVSLD VNKKRMLKTP AQIMALENFY KENRFPLDEM 60 KAQLAVQIGL TEKQISSWFC HRRLKDKRRD ESYANGRQDH SSGVIQDHGS GLRQDSCGSI 120 KQGDYRHIDL REVESRRIYG QEPLAADLTY EHRSHQNPYD AHMEDTSSES SSSLHDQLFS 180 ESRDPYDMQV SDKLTENGAL MQINPGSSKS VGYKPSGYLK VKGQIENPAI TAVKKQLGRH 240 YQEDGPVLGI EFDALPPGAF EFLRSNPVNA ASIYVGDPQQ PHSPDIYGVI KQPNLNIINE 300 VHNSKMSSQD SCMEGTKFNT VHGSERQERK SHHQLKYKSS VLCSNPFPGQ NSLFDSNKGS 360 SEKTAVSDCK RSGMSSKLSV ERMGSDSLSN HPGSYGGKIA NEQEKSWLHD NDNHTYKAPK 420 NENLSRTSNL IHRCSEFIGP ERGPSARMAK VEKPGGEWKL KKGFPVRVKT DPTNELRVAK 480 RVNVEFPLQD FVANASHARL PLLTNPTKGS SMDVPSSFSE DETAETSSSS G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 90 | RRLKDKRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 5e-80 | HB-other family protein |