PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731640.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 436aa MW: 46006 Da PI: 6.6237

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6e-12	260	305	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022731640.1 260 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 305 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MQPCSREMQA MNSLLNPTQQ IPLQDLQSNG NSNAHQQIQN PQFDPTSPHD DFLEQMLSTL 60 PSCSWSDLKS PWDPPKSDET GPPNPDNNVG FHYDEILASK LRQHQINGGG GSSSAAAAMK 120 MMMQQQMMLE GRATAAAGAG GGGGFTMPLS LGSGAAGSHQ NDNIVDGSSF KSPNHQGGDG 180 SVQALCNSFG AGSLHGTNQS SNQFQHFHHP QGGNMQAQNF GVTAGTVMNQ SQASGSTTGG 240 TPAQPKQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY 300 VKFLQLQVKG GGDCIQTSAN GKQTSSPNDS LTVTEHQVAK LMEEDMGSAM QYLQGKGLCL 360 MPISLATAIS TATCHSRNPM INNANPNNGN SNHLLLQSSG EGPSSPSMSV LTVQSATVGN 420 GAIDGSVKDA TSVSKP

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MQPCSREMQA MNSLLNPTQQ IPLQDLQSNG NSNAHQQIQN PQFDPTSPHD DFLEQMLSTL  60
PSCSWSDLKS PWDPPKSDET GPPNPDNNVG FHYDEILASK LRQHQINGGG GSSSAAAAMK  120
MMMQQQMMLE GRATAAAGAG GGGGFTMPLS LGSGAAGSHQ NDNIVDGSSF KSPNHQGGDG  180
SVQALCNSFG AGSLHGTNQS SNQFQHFHHP QGGNMQAQNF GVTAGTVMNQ SQASGSTTGG  240
TPAQPKQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY  300
VKFLQLQVKG GGDCIQTSAN GKQTSSPNDS LTVTEHQVAK LMEEDMGSAM QYLQGKGLCL  360
MPISLATAIS TATCHSRNPM INNANPNNGN SNHLLLQSSG EGPSSPSMSV LTVQSATVGN  420
GAIDGSVKDA TSVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	270	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-61	bHLH family protein