PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730433.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 750aa    MW: 83519.4 Da    PI: 7.7281
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.5e-2462163199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k+lt sd++++g +++ +++a+e+     ++ ++ s++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++
  XP_022730433.1  62 FCKTLTASDTSTHGGFSVLRRHADEClppldMSRQPPSQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENG 154
                     99*****************************444556679************************************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_022730433.1 155 ELRVGVRRA 163
                     9*****996 PP
2Auxin_resp119.82.1e-39188270183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha +t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_022730433.1 188 AWHACTTQTIFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWQDSKWRCLK 270
                     79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MPLYNLPSKI LCRVINVQLK AEPDTDEVFA QVTLLPEPIQ DENTVGKEPP TPQPPRFLVH  60
SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMSRQPPSQ ELVAKDLHGN EWRFRHIFRG  120
QPRRHLLQSG WSVFVSSKRL VAGDAFIFLR GENGELRVGV RRAMRQQGIV PSSVISSHSM  180
HLGVLATAWH ACTTQTIFTV YYKPRTSPAE FIVPFDQYME SVKNNYSIGM RFKMRFEGEE  240
APEQRFTGTI VGIEDADPQR WQDSKWRCLK VRWDETTTMP RPERVSPWKI EPALAPSALN  300
PLPLPRPKRP RSNAVPSSPD SSVLPREGSS KVTVDPSPAI GFSRVLQGQE FSTLRGNFAE  360
SNESDTAEKS VMWPPVDDEK IDVVSAARRF GSENWVSSGR HEPTCTDLLS GFGSNAGMAD  420
QTSVAGNPMR KQLPDQEGGI GCWSLLPSGL SLKLDKKNAK PPLQGSDVPY QVRGNGRFSG  480
FGDYPMLKGR RIEHSHGNWL MPPPTSSHYE NLVHSRDLMP KTSLVQEHEN GKSREGNCKL  540
FGIPLISNSV ASEPAVSNIN ALNKRVGRPQ APSHQVHTFE SDRRSEKSKV SHLAEDLSAC  600
NEQDKIFRLG QPQTREVPSK PSNASTRSCT KVHKQGIALV RSVDLTKFNN YGELIAELDQ  660
LFEFGGELMA PKKNWLVVYT DDEGDMMLVG DDPWQEFCAM VRKIGIYTRE EVQKMKPGSL  720
SSRGEDNPVS AEGLDAEEVR CPSAFSAGNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein