PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730252.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TALE

Protein Properties

Length: 451aa MW: 50003.4 Da PI: 6.2316

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	388	421	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_022730252.1 388 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 421 469*****************************87 PP
2	ELK	28.7	3e-10	342	363	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_022730252.1 342 ELKHELKQGYKEKIVDIREEIL 363 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MAFHHNHLSQ DLPLHHFTDQ QQQQQTNQQQ QTSQLQETTG PNWLNNALLR SQQPQPPQPH 60 AHFSDPNFLN LHTTTTASDS SAASQAPNQW LSRSSSSLLQ RNHSEVIDDV AAAAAAAAAA 120 AGRGGRGDSM MAVESGDLKN INSETMNNNK SEGVVVESGG GGAAVDGAVN WQNARYKAEI 180 LAHPWYEQLL SAHVACLRIA TPVDQLPRID AQLAQSQHVV AKYSALGGGA QGLVVDDKEL 240 DQFMTHYVLL LCSFKEQLQQ HVRVHAMEAV MACWEIEQSL QSLTGVSPGE GTGATMSDDD 300 DDQVDSDVNL FDGSLEGPDS MGFGPLIPTE NERSLMERVR QELKHELKQG YKEKIVDIRE 360 EILRKRRAGK LPGDTTSALK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK 420 RNWHSNPSTS TVLKSKRKRS NAGENNGDRF M

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MAFHHNHLSQ DLPLHHFTDQ QQQQQTNQQQ QTSQLQETTG PNWLNNALLR SQQPQPPQPH  60
AHFSDPNFLN LHTTTTASDS SAASQAPNQW LSRSSSSLLQ RNHSEVIDDV AAAAAAAAAA  120
AGRGGRGDSM MAVESGDLKN INSETMNNNK SEGVVVESGG GGAAVDGAVN WQNARYKAEI  180
LAHPWYEQLL SAHVACLRIA TPVDQLPRID AQLAQSQHVV AKYSALGGGA QGLVVDDKEL  240
DQFMTHYVLL LCSFKEQLQQ HVRVHAMEAV MACWEIEQSL QSLTGVSPGE GTGATMSDDD  300
DDQVDSDVNL FDGSLEGPDS MGFGPLIPTE NERSLMERVR QELKHELKQG YKEKIVDIRE  360
EILRKRRAGK LPGDTTSALK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK  420
RNWHSNPSTS TVLKSKRKRS NAGENNGDRF M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	419	439	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein