PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730119.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family Trihelix
Protein Properties Length: 305aa    MW: 35235.4 Da    PI: 5.343
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.18.5e-1225101279
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                     W  ++ l L++    +e + +++ +  ++W+ + +++ + g+  s++qC+ kw+ l  +ykkik++e++    + s +
  XP_022730119.1  25 WAAHHLLILVNEIAATEADCSNALSSFQKWKIIVENCNALGVPHSSNQCRRKWNLLLHDYKKIKRWESES-GLRDSYW 101
                     99999999999999*****************************************************985.4444455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEHEDDNPSR LSGIRRTRSL ASPYWAAHHL LILVNEIAAT EADCSNALSS FQKWKIIVEN  60
CNALGVPHSS NQCRRKWNLL LHDYKKIKRW ESESGLRDSY WSLDGQRRKQ YELPENFEED  120
LFKAINDVVR LLEDKSGTDR DSDPEAQDDK LGIIADLGPR KQKRKLIPLR SPAEAKSHKR  180
CAVEKLKEIH LAEQPQESPS EEKLQRSEAE ERSWRTEAEE NPEKCYMDIN HMFSMKDEEQ  240
SMVARLGENA EQIHAVVEEN FNDHRAANVK NVDDSRTDFI RRQGDLLIGC LGDILSTLNQ  300
FSELV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.15e-56Trihelix family protein