PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730016.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 788aa    MW: 88681.7 Da    PI: 5.0359
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS356.63.8e-1094117851373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+avs++d + a +lL++++e++sp gd +qRla +f ++L+arl +s+  + +  ++ ++++++ ++ l+a+k +  ++P+ k++ 
  XP_022730016.1 411 LRNLLILCAQAVSADDRRTAGELLKQIKEHSSPLGDGTQRLAYFFGNGLEARLDGSGAVIHNFYASLASKKTTAADILKAYKRYLCACPFKKLAI 505
                     6899***************************************************999999999999999999********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++I+   e+++++Hi+Df+i +G+QWp L+q L++ p+gpp+lR+Tg++ p+ g   +e++eetg+rLak++e+++vpfe+++++a+++e+
  XP_022730016.1 506 FFANKMIYHMSEKASALHIVDFGILYGFQWPILIQHLSKVPGGPPKLRVTGIEIPQRGfrPAERIEETGRRLAKYCERFNVPFEYKPIAAQNWET 600
                     ********************************************************99************************************* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++++++++E+laVn+ ++ ++llde+++++ +r++vLkl+++++P+++v++  + ++n++ F++rf eal + sa+fd++e++l+re+ +r+
  XP_022730016.1 601 IQIDDIKINSNEMLAVNSLFRFENLLDETAEVDCPRNAVLKLIRKMNPDIFVHSIVNGSYNAPFFFTRFREALFHLSAIFDMFENTLSREDPARS 695
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + Ere+ g+e+vnvvaceg++r +r et+++W+ r+ +aGFkp+pl+++ +k+ +  l   + + + ++e+++++++gWk+r L++ S+W
  XP_022730016.1 696 MFEREFYGQEAVNVVACEGSARGQRPETYKQWQIRMIRAGFKPLPLDQELMKKLRDKLTAWYHKDFVIDEDNHWMLQGWKGRILYASSCW 785
                     **************************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    
MAMDPKFTEF SDYINGYRVE DDTFQLNTGQ YPNITNGFEF NAPSPDLSFM NMNLPVIHPD  60
PDPGIFVPSI TVSSHGSSFS ASTGWSPEGE SSSPSDDSDS TDPVLKYISQ MLMEENMDDK  120
PFMLSDYLAL EDAEKSLYEV LGEQYPPTNQ TQPFLSQNTE SPDSNLCGTS SDYGSNDHSS  180
TSITTSNGTS NYIDHQGVGE VGEPAPSLLQ APLSGDYYFQ PTSQQPSSQF PVNSTNSLSN  240
IGKGVMGSSV SELLAQNIFS DKESVLQFQR GFEEASKFLP TSDQLIIDLE SNTFPMGQKG  300
KVPKVVVKVE KDERENSPDG LAGRKNHERD DRELEEGRSN KQSATYTEES ELSDMFDKVL  360
LYNEAKPLCC IDEIVKHGET KTLQQKEQSN GSSIAKTRSK KQGKKKETVD LRNLLILCAQ  420
AVSADDRRTA GELLKQIKEH SSPLGDGTQR LAYFFGNGLE ARLDGSGAVI HNFYASLASK  480
KTTAADILKA YKRYLCACPF KKLAIFFANK MIYHMSEKAS ALHIVDFGIL YGFQWPILIQ  540
HLSKVPGGPP KLRVTGIEIP QRGFRPAERI EETGRRLAKY CERFNVPFEY KPIAAQNWET  600
IQIDDIKINS NEMLAVNSLF RFENLLDETA EVDCPRNAVL KLIRKMNPDI FVHSIVNGSY  660
NAPFFFTRFR EALFHLSAIF DMFENTLSRE DPARSMFERE FYGQEAVNVV ACEGSARGQR  720
PETYKQWQIR MIRAGFKPLP LDQELMKKLR DKLTAWYHKD FVIDEDNHWM LQGWKGRILY  780
ASSCWIPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein