PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729742.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 293aa    MW: 31758.2 Da    PI: 6.5067
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.2e-17205241135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp++Rrgp+g+++LCnaCGl+++ kg+
  XP_022729742.1 205 CTHCGVSSksTPMMRRGPSGPRSLCNACGLFWANKGT 241
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MYGQSLPMSI SAQIVGSRAD VDDDVSASAA VDNHQSVRYD AHPLDDGVGV EDVATDPIYV  60
TANTASASDL AVVQRVDDAS QLTLSFRGQV YVFDAITPDK FHAVLLLLGA CELTSGPHGV  120
EMSSQNLRGG VDFPRSNQPL RAASLDRFRQ KRKERCFDKK VRYSVRQEVA LRMQRNKGQF  180
TSSKKSDGTY SWGTQDDDNL PDTLCTHCGV SSKSTPMMRR GPSGPRSLCN ACGLFWANKG  240
TLRDIPKKTR DHSLTPVEQG DSEANSDSGT AIHSQSNVVS FSNGDSSALI AEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.24e-85GATA family protein