PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729570.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 716aa MW: 79501.4 Da PI: 9.0609

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	596	645	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022729570.1 596 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 645 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MVLQKRLDYG FNGYQVPATP RATRSARKRV PFRKRVEDNQ ISAFDLLATV AGKLLLDKES 60 TPASSNKLNA EDQSAVEKNN VKEERRDGNQ LLKLETCNQD STDRDFFVSE LVSQTNDPNY 120 SSRESPSLQN NAHFGFSSVI TTSDCSERFD AWKLMNGKIK NEMGSFPCKV ETGPFVCETS 180 GGCIKPESEN KGLKDEELDI TDKVSIGEAA DTCLLEDPVV LDGKPPALVS SDSSGKARSF 240 GNQNPLSYFP ANRDDVNVVS RDDDEKSSGC THPSPIRKPF RPTPRIGDRR IRKILASKYR 300 KVAPRLKDVT YYNSDENLKS GYCDRSTYKR SRSERNYPFK KRKFLHYISA SNLDRGTSSE 360 GMSDSPEKNI NGNASSAYPK MHGGTGESSS LAEQCKSFHS RDSHVKLRIK SFRVPELFIE 420 IPESATVGSL KRTVMEAVTA LLGGGLRVGV LLQGKKVRDD NKTLLQTGIS RDNQIDALGF 480 SLEPNPSQTS PLSCPGGSPL MLPCDTPLPL ARYPANPGLV NQVTCDPSTE PHMPNLGNFV 540 ESDHDSAPSP TDMSFDKSTT DSKALVPVPA MSVEALAVVP ANRKSKRSEV VQRRIRRPFS 600 VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR ISPQQRRGEP 660 VPQELLDRVL TAHAYWSQQQ AKQQLKPQQQ PESCLHIYNS TIRKSSTCDV DEKNLG

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MVLQKRLDYG FNGYQVPATP RATRSARKRV PFRKRVEDNQ ISAFDLLATV AGKLLLDKES  60
TPASSNKLNA EDQSAVEKNN VKEERRDGNQ LLKLETCNQD STDRDFFVSE LVSQTNDPNY  120
SSRESPSLQN NAHFGFSSVI TTSDCSERFD AWKLMNGKIK NEMGSFPCKV ETGPFVCETS  180
GGCIKPESEN KGLKDEELDI TDKVSIGEAA DTCLLEDPVV LDGKPPALVS SDSSGKARSF  240
GNQNPLSYFP ANRDDVNVVS RDDDEKSSGC THPSPIRKPF RPTPRIGDRR IRKILASKYR  300
KVAPRLKDVT YYNSDENLKS GYCDRSTYKR SRSERNYPFK KRKFLHYISA SNLDRGTSSE  360
GMSDSPEKNI NGNASSAYPK MHGGTGESSS LAEQCKSFHS RDSHVKLRIK SFRVPELFIE  420
IPESATVGSL KRTVMEAVTA LLGGGLRVGV LLQGKKVRDD NKTLLQTGIS RDNQIDALGF  480
SLEPNPSQTS PLSCPGGSPL MLPCDTPLPL ARYPANPGLV NQVTCDPSTE PHMPNLGNFV  540
ESDHDSAPSP TDMSFDKSTT DSKALVPVPA MSVEALAVVP ANRKSKRSEV VQRRIRRPFS  600
VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR ISPQQRRGEP  660
VPQELLDRVL TAHAYWSQQQ AKQQLKPQQQ PESCLHIYNS TIRKSSTCDV DEKNLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-153	MYB_related family protein