PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729002.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 259aa    MW: 28398.7 Da    PI: 10.2344
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.53.9e-32112168158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekk+  k+rkpylheSRh+hA+rR+RgsgGrF
  XP_022729002.1 112 QEPVYVNAKQYQGILRRRQARAKAELEKKV-VKARKPYLHESRHQHAIRRARGSGGRF 168
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKTMMLIKKA KLLLPLVQLE MVDKNITICS ILHLPCLLCV TNASHSNLCL SLLAIQLIPS  60
FLPIPLQACA SNPYQDPFYG GMMAAYGHQP LGYPPFVGMP HARMALPIEM AQEPVYVNAK  120
QYQGILRRRQ ARAKAELEKK VVKARKPYLH ESRHQHAIRR ARGSGGRFAK KTDADTSKHM  180
AEEKGTGSGP ALSSQSASSS GSEQLPADSA ETWNSLLTQQ EARGTRLHDT HHVNGSGPYQ  240
KRGGSISSNQ TSHRPLATQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-51NF-YA family protein