PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729000.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 319aa    MW: 34443.9 Da    PI: 8.7591
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1025.5e-32172228158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekk+  k+rkpylheSRh+hA+rR+RgsgGrF
  XP_022729000.1 172 QEPVYVNAKQYQGILRRRQARAKAELEKKV-VKARKPYLHESRHQHAIRRARGSGGRF 228
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MQSKSEGGSR SEPDPHGVPT TAVYAEPWWR NIGYGAISPC VRGGNASNSS SMEGPNGSES  60
NDGQSLSNGL NEDNDVNKES QTTASSRSVG NGGQEHHNLQ HFTSTMPAMR DECLTQQPLL  120
ELVGHSIACA SNPYQDPFYG GMMAAYGHQP LGYPPFVGMP HARMALPIEM AQEPVYVNAK  180
QYQGILRRRQ ARAKAELEKK VVKARKPYLH ESRHQHAIRR ARGSGGRFAK KTDADTSKHM  240
AEEKGTGSGP ALSSQSASSS GSEQLPADSA ETWNSLLTQQ EARGTRLHDT HHVNGSGPYQ  300
KRGGSISSNQ TSHRPLATQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.15e-75NF-YA family protein