PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728289.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 417aa MW: 46773 Da PI: 9.0654

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	96	138	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eE ++l d ++++ + + Ia ++++ Rt +++k+r+++ XP_022728289.1 96 TWTKEETDQLFDFCERFDLR-FIIIADRFPTSRTVEELKDRYYS 138 7*****************.*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MVSREVYALT GGLAPLMPSI EVSQLKRRPP SDEKITWQWL PFTSSARKDD LQLYHWARVV 60 NGVPPTGDYS FAKYNKSVDV IRYTDEEYEK YLTDPTWTKE ETDQLFDFCE RFDLRFIIIA 120 DRFPTSRTVE ELKDRYYSVS RAILIARAPS PGEVAGHPLV KEPYNVSQET ERKRALSMVL 180 SQTKHQERKD AEVIAEAKRI AESRMAAQGV EEPDLPVTSD IGPENAEKAI GHGDTISPSN 240 VHVPSAAVAP STSILADNTS TLASLRMLWV YLRTYALEQM VQAASSSAGL RTIKRVEQTL 300 QDLGVNLKPK VPTKAVCAEH LELRKEILTL LNLQKQLQYK EAEGSSFRDG SYGDMPGTPK 360 RSLRAADQDR TFVPDTISFG GERVGKREQK RKGPGRVAET PSSPAHKRPR KLKASDL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MVSREVYALT GGLAPLMPSI EVSQLKRRPP SDEKITWQWL PFTSSARKDD LQLYHWARVV  60
NGVPPTGDYS FAKYNKSVDV IRYTDEEYEK YLTDPTWTKE ETDQLFDFCE RFDLRFIIIA  120
DRFPTSRTVE ELKDRYYSVS RAILIARAPS PGEVAGHPLV KEPYNVSQET ERKRALSMVL  180
SQTKHQERKD AEVIAEAKRI AESRMAAQGV EEPDLPVTSD IGPENAEKAI GHGDTISPSN  240
VHVPSAAVAP STSILADNTS TLASLRMLWV YLRTYALEQM VQAASSSAGL RTIKRVEQTL  300
QDLGVNLKPK VPTKAVCAEH LELRKEILTL LNLQKQLQYK EAEGSSFRDG SYGDMPGTPK  360
RSLRAADQDR TFVPDTISFG GERVGKREQK RKGPGRVAET PSSPAHKRPR KLKASDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein