PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727299.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 315aa MW: 36654.7 Da PI: 8.3273

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.5	1.7e-18	37	126	2	86
trihelix 2 WtkqevlaLiearremeerlrr......gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt qe+l Li+a+r ++er + ++ + +W++v ++++++g+ r+++qC++kw+nl ++ykk+++ ++++ sess ++p + ++e XP_022727299.1 37 WTIQETLILITAKRLDDERRIKpstsshSRPGELKWKWVENYCWDHGCYRNQNQCNDKWDNLLREYKKVRQYQSSQ-SESSDHFPSYWSME 126 ***********955555443222222458899************************************96.89999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MSNPPPPQPS TLHHQVPYIT TPTTLTTTNR EYRKGNWTIQ ETLILITAKR LDDERRIKPS 60 TSSHSRPGEL KWKWVENYCW DHGCYRNQNQ CNDKWDNLLR EYKKVRQYQS SQSESSDHFP 120 SYWSMERHQR KLHNLPTNMS PEVFKALNDV LQRKNNIHQQ QQQEQQPQQQ QQQSTSSIHQ 180 QQLKQPSISQ PTDQLAVGTD QQPPEIEAPI TVSEESDSSE TESSENLDSE TKRKKVRKIG 240 SSIMRSASVL AQTLKSCEEK KEKRHQEVMK LEQRRLQIEE TRNEVNQKGI TDLVAAMTNL 300 SGAIQSLIAN HYDQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	263	KRKKVRKIGSSIMRSASVLAQTLKSCEEKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-49	Trihelix family protein