PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727223.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family BBR-BPC
Protein Properties Length: 310aa    MW: 34833.7 Da    PI: 8.7706
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind326.67.4e-1001631013301
       GAGA_bind  13 yye................paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensl 91 
                     yy+                ++++l   +++++ms++aerda+irer++a+se+k+a+a+rd+a++qrdkalaer+ al+erdn+l+ l+++en+ 
  XP_022727223.1  16 YYKgvhppwnmmpqhhmkeQSNALV--MNKKIMSILAERDAAIRERDIAVSERKEALATRDEALQQRDKALAERDGALMERDNALAVLQYRENA- 107
                     5556666666664444322234444..99****************************************************************8. PP

       GAGA_bind  92 asalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader 186
                      ++ p g+++ +g k+++   + + ++++++    +e++ ++a+p+++ a e+ ++  +k+++++k   +k  +k kk  e+  ++  +e   ++
  XP_022727223.1 108 -MNFPIGSGIQRGGKCMHP--TYHSTDMDETVN--SEMHVTDAFPVSTIACEEGKSCPVKRTKENKPVSSKSPQKMKKVDEDLSRQAGTEV--KK 195
                     .56788999********94..444566666555..59***************999999998888777777778899998888877777777..67 PP

       GAGA_bind 187 skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                      k+e +++d++ln  ++De ++P+PvC+CtG++rqCYkW nGGWqS+CCttt+S yPLP+ +++r+aR++grKmS+++f+klL++L aeG dls 
  XP_022727223.1 196 CKSEGNDQDIGLNMEKFDEIRIPAPVCTCTGVPRQCYKWENGGWQSSCCTTTMSSYPLPQIANKRHARVGGRKMSGNVFTKLLSRLVAEGQDLSI 290
                     9********************************************************************************************** PP

       GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                     p+DLk+hWA+HGtn+++ti+
  XP_022727223.1 291 PLDLKSHWARHGTNRYITIK 310
                     *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MAGGGQQENG RYMLDYYKGV HPPWNMMPQH HMKEQSNALV MNKKIMSILA ERDAAIRERD  60
IAVSERKEAL ATRDEALQQR DKALAERDGA LMERDNALAV LQYRENAMNF PIGSGIQRGG  120
KCMHPTYHST DMDETVNSEM HVTDAFPVST IACEEGKSCP VKRTKENKPV SSKSPQKMKK  180
VDEDLSRQAG TEVKKCKSEG NDQDIGLNME KFDEIRIPAP VCTCTGVPRQ CYKWENGGWQ  240
SSCCTTTMSS YPLPQIANKR HARVGGRKMS GNVFTKLLSR LVAEGQDLSI PLDLKSHWAR  300
HGTNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-131BBR-BPC family protein