PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727163.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ERF

Protein Properties

Length: 473aa MW: 52667.4 Da PI: 5.9051

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.8	6.4e-19	235	285	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ ++r +lg+f+tae+Aa a+++ + kl+ge XP_022727163.1 235 LYRGVRQRH-WGKWVAEIRLPRN---KTRLWLGTFDTAEDAALAYDREAFKLRGE 285 59****9.******854...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MAAAKNSGKS KMVVNDETQK MTTGQDWETV KGNDLDLGFE RRQWKPVFDE ASMSQTPLKK 60 IRSPEHQGPA EPSASLAHQS SSFSALSSVS TSSPSSLTLC PPSSSCSSNA SLPSSRLVFP 120 FAFDASHQPI YFPQQYRNTP TLMPIFCPSS QNQQYTISFN PEQQQQHRFV YRPFFAGESS 180 LPPHQQQQQQ QQQLLRCCSD ALNLSPRRMM MMSRLGQDDR QLLRPPVQPI NTTKLYRGVR 240 QRHWGKWVAE IRLPRNKTRL WLGTFDTAED AALAYDREAF KLRGENARLN FPELFLGKDK 300 DTSTAPSSIV SSPRTLHESS KPNQNQNLPK NEQEGLNLQS AKMEMMPPPA QPQGDNPDSD 360 SGMGSSEATA SDEVQMTTEG PGTGEGVSGS HELVWGDMTE SWFNAIPAGW GPGSPVWDDL 420 DTTNNLLFPS NLTLASQNQQ EFSDSDLQKQ QDSSASSSSA SCPMKRFFWK DQD

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MAAAKNSGKS KMVVNDETQK MTTGQDWETV KGNDLDLGFE RRQWKPVFDE ASMSQTPLKK  60
IRSPEHQGPA EPSASLAHQS SSFSALSSVS TSSPSSLTLC PPSSSCSSNA SLPSSRLVFP  120
FAFDASHQPI YFPQQYRNTP TLMPIFCPSS QNQQYTISFN PEQQQQHRFV YRPFFAGESS  180
LPPHQQQQQQ QQQLLRCCSD ALNLSPRRMM MMSRLGQDDR QLLRPPVQPI NTTKLYRGVR  240
QRHWGKWVAE IRLPRNKTRL WLGTFDTAED AALAYDREAF KLRGENARLN FPELFLGKDK  300
DTSTAPSSIV SSPRTLHESS KPNQNQNLPK NEQEGLNLQS AKMEMMPPPA QPQGDNPDSD  360
SGMGSSEATA SDEVQMTTEG PGTGEGVSGS HELVWGDMTE SWFNAIPAGW GPGSPVWDDL  420
DTTNNLLFPS NLTLASQNQQ EFSDSDLQKQ QDSSASSSSA SCPMKRFFWK DQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	1e-48	ERF family protein