PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725982.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 431aa MW: 47380.5 Da PI: 6.0767

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.2	2.8e-26	162	213	4	56
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 ++WtpeLH+rFv+ave L G +kA+P++ilelm++++Lt+++++SHLQkYR++ XP_022725982.1 162 VDWTPELHRRFVQAVELL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 213 68**************.******************************86 PP
2	Myb_DNA-binding	36.8	9.1e-12	163	211	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av++lG + +++I + mg +t+ ++ s++qky+ XP_022725982.1 163 DWTPELHRRFVQAVELLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 211 6******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MLAVAPLRNT TKDEQKGEMQ CFTISSEEFP DFADENLLES IDFDDLFDSI DEGDLLPDLE 60 MDTEIFAALP SGGGDEESEM NTSVGKTDED STQRKEEEEE KVSGSGSGLG SSSTKGEEIV 120 NKGEEPTAVN KTPSKEADKG RKSSAQAKNN NQGKRKVKVI TVDWTPELHR RFVQAVELLG 180 VDKAVPSRIL ELMGIDCLTR HNIASHLQKY RSHWKHLLAR EAEAATWTHR RQMYGSSTSA 240 GGGMRDMNPW LAPTMGFPPM SPMHHHFRPM HVWGHPTMDQ SLMHIWPKHL AHTPSPPPPP 300 QSTWRLPLPP LPADPSYWQH HQRVPNGLTP GTPCFPQPLA PTRFAATLVP GISPHHAMYK 360 ADPGIGVPAG QSVPHPLIDI HPSKESIDAA IEDVLSKPWL PLPLGLKPPS TDGVLGELQR 420 QGVPKIPPSC A

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MLAVAPLRNT TKDEQKGEMQ CFTISSEEFP DFADENLLES IDFDDLFDSI DEGDLLPDLE  60
MDTEIFAALP SGGGDEESEM NTSVGKTDED STQRKEEEEE KVSGSGSGLG SSSTKGEEIV  120
NKGEEPTAVN KTPSKEADKG RKSSAQAKNN NQGKRKVKVI TVDWTPELHR RFVQAVELLG  180
VDKAVPSRIL ELMGIDCLTR HNIASHLQKY RSHWKHLLAR EAEAATWTHR RQMYGSSTSA  240
GGGMRDMNPW LAPTMGFPPM SPMHHHFRPM HVWGHPTMDQ SLMHIWPKHL AHTPSPPPPP  300
QSTWRLPLPP LPADPSYWQH HQRVPNGLTP GTPCFPQPLA PTRFAATLVP GISPHHAMYK  360
ADPGIGVPAG QSVPHPLIDI HPSKESIDAA IEDVLSKPWL PLPLGLKPPS TDGVLGELQR  420
QGVPKIPPSC A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	3e-87	G2-like family protein