PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724635.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 400aa MW: 45938.3 Da PI: 4.3982

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.4	6.6e-17	165	249	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L+ea + + +r++l+ + W+ev++k++e ++er+ +qC+++++ l+k+ykk+k++ + + s+++yf++++ XP_022724635.1 165 WTERETFVLLEAWGDQFLQCGRKSLRSKEWQEVAEKVSEvSKIERTDTQCRNRLDTLKKKYKKEKAMLAET-GATASKWVYFKKMD 249 ***********************************762678**********************95.77777******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDDIGDDARY LANPYGVSHQ QGYDSLNRQK LPVRNVPYSG PIGNQYVDDD EYEEEEEDEE 60 DLGEEEENHM QNNGVQYAGK DMDDDDDDDD DELDDDEDDY NVGGDKQKGY NRKNDDVELE 120 RHPKKRKLKS LVSSYEFAPR VPAPAVTAPS VPKPSHGGRN SLTDWTERET FVLLEAWGDQ 180 FLQCGRKSLR SKEWQEVAEK VSEVSKIERT DTQCRNRLDT LKKKYKKEKA MLAETGATAS 240 KWVYFKKMDI LMSTPPQQGG LSCGLDSGEY VFMNPRVYLN RANGLDEMRD SPANSESADG 300 EEDVSDGLPP KKRRFRRQCD EGSSFKLLAD SIEKFSDIYE KIENSKRQQM LELEKMRMDF 360 HRELEMQKQQ IMERAQAEIA KIHQGFDEEN DSAENASRSG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDDIGDDARY LANPYGVSHQ QGYDSLNRQK LPVRNVPYSG PIGNQYVDDD EYEEEEEDEE  60
DLGEEEENHM QNNGVQYAGK DMDDDDDDDD DELDDDEDDY NVGGDKQKGY NRKNDDVELE  120
RHPKKRKLKS LVSSYEFAPR VPAPAVTAPS VPKPSHGGRN SLTDWTERET FVLLEAWGDQ  180
FLQCGRKSLR SKEWQEVAEK VSEVSKIERT DTQCRNRLDT LKKKYKKEKA MLAETGATAS  240
KWVYFKKMDI LMSTPPQQGG LSCGLDSGEY VFMNPRVYLN RANGLDEMRD SPANSESADG  300
EEDVSDGLPP KKRRFRRQCD EGSSFKLLAD SIEKFSDIYE KIENSKRQQM LELEKMRMDF  360
HRELEMQKQQ IMERAQAEIA KIHQGFDEEN DSAENASRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	5e-74	Trihelix family protein