PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724532.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 674aa MW: 74530.8 Da PI: 7.9293

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.5	3.6e-09	624	670	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 +rW+ +E++ l ++v ++G+ W++I + + +Rt ++k++w++ XP_022724532.1 624 NRWSIDEEKALQEGVLKYGTS-WTLILSSNPgafVNRTSGDLKDKWRN 670 69***************99.***********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MDNSVFLFSS ASHGGASSFL REYLSNSNIN NADDSTFCLL NKASIIHSIR QRTANCSLPE 60 GILDSLQIIE QLDRQQGLPI SDSMRAAFCA LAVHYTLTSL PHSWPCFFDA VQRIWRFRIR 120 NIEDSGTSQL LGPDLRKWRD EIEAALWDNE ISHKLLGINT QDEALRAIRV YLEEACSSMK 180 PAFVRLELAS PAGPTIDPVP AQSPPCCTDK GKRIMGVNSQ TRFKLRSSHR RYKGPVIISA 240 SEEDEPSCSK YGSLSTPEVN KLQDELNSST LEAGVTDPLP KALEVTETDE VASNLARKNL 300 HTKGIVEDCN KDKGVPATST DVPSTSFNPT MRHAQAEEGN QGTQAFIQQN KVNRPSLIER 360 NVSDQAPAHR HHYINNGKGI LKVNSQTRCK LRSSHRHHKG LVIIADSEEG RPSCNKYVSL 420 STPEIKQLQD ALKSSNADLR AAVTDPLPEA LEVAERVASY MAWKNLHAKS IVEEGHKDKG 480 VPATSGNPTV DVLETSVNCT IESAQANWIA ADIAGKNLCV KALGEDNSKM DRSVPPPSVN 540 PSRVPAQDKE GSQGNQGSLH QNKPSLMERN CTARTYEWED SIDVSTEETA SCSNKCRLPS 600 PKTKHVSPLK EHVIRKWVRK RKMNRWSIDE EKALQEGVLK YGTSWTLILS SNPGAFVNRT 660 SGDLKDKWRN MGGK

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MDNSVFLFSS ASHGGASSFL REYLSNSNIN NADDSTFCLL NKASIIHSIR QRTANCSLPE  60
GILDSLQIIE QLDRQQGLPI SDSMRAAFCA LAVHYTLTSL PHSWPCFFDA VQRIWRFRIR  120
NIEDSGTSQL LGPDLRKWRD EIEAALWDNE ISHKLLGINT QDEALRAIRV YLEEACSSMK  180
PAFVRLELAS PAGPTIDPVP AQSPPCCTDK GKRIMGVNSQ TRFKLRSSHR RYKGPVIISA  240
SEEDEPSCSK YGSLSTPEVN KLQDELNSST LEAGVTDPLP KALEVTETDE VASNLARKNL  300
HTKGIVEDCN KDKGVPATST DVPSTSFNPT MRHAQAEEGN QGTQAFIQQN KVNRPSLIER  360
NVSDQAPAHR HHYINNGKGI LKVNSQTRCK LRSSHRHHKG LVIIADSEEG RPSCNKYVSL  420
STPEIKQLQD ALKSSNADLR AAVTDPLPEA LEVAERVASY MAWKNLHAKS IVEEGHKDKG  480
VPATSGNPTV DVLETSVNCT IESAQANWIA ADIAGKNLCV KALGEDNSKM DRSVPPPSVN  540
PSRVPAQDKE GSQGNQGSLH QNKPSLMERN CTARTYEWED SIDVSTEETA SCSNKCRLPS  600
PKTKHVSPLK EHVIRKWVRK RKMNRWSIDE EKALQEGVLK YGTSWTLILS SNPGAFVNRT  660
SGDLKDKWRN MGGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	616	622	KWVRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	1e-14	MYB_related family protein