PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724472.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 734aa MW: 80019.5 Da PI: 7.1138

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.7	1.3e-24	157	258	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + ++ XP_022724472.1 157 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyN-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGED 248 99**************************963.3445679********************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r XP_022724472.1 249 GELRLGIRRV 258 99***985 PP
2	Auxin_resp	123.8	1.2e-40	283	364	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 ++ha+s+ksvF+++YnPras+seF+++++k+ k+l++++s+GmRfkm+feted+ err++G+v+g+ d+dpvrWp+SkWr+L XP_022724472.1 283 VVHAISMKSVFSIYYNPRASSSEFIIPLHKFWKSLDHSFSIGMRFKMRFETEDAVERRYTGLVTGIGDMDPVRWPGSKWRCL 364 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MGGLIDLNTT EDDETPLSGS LSPSSSSASV LSVSGAAASG SSSSSSVCLE LWHACAGPLI 60 SLPKRGSVVV YFPQGHLEQV SDFSGVAAAY DLPPHVICRV VDVKLHAEGA TDEVYSQVSL 120 VPESEQIEQK LQERKTEAAG EDEDAEVDIK STTPHMFCKT LTASDTSTHG GFSVPRRAAE 180 DCFPPLDYNQ QRPSQELVAK DLHGLEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA 240 VLFLRGEDGE LRLGIRRVTQ IKNGTSFPSL CSQQLNSSTF VDVVHAISMK SVFSIYYNPR 300 ASSSEFIIPL HKFWKSLDHS FSIGMRFKMR FETEDAVERR YTGLVTGIGD MDPVRWPGSK 360 WRCLLVRWDD IDTNRHCRVS PWEIESSGSI SSSNILLTPG SKRSRVGLPS GKPEFVVTDG 420 IGASNFGESS RFPKVLQGQE ILGFNTLYDG ADSQNMHQSD IRRCFPGSNG SGIAAIGNVG 480 RDPPVNPDIS YKGVGFGESF QFHKVLQGQE IFVSPSYRRG PTADENREND GPGVSDAGQL 540 SGTRSRWSSL MQGHNAHSRI LPSAQVSSPS SVLMFQHASN PIPNLNSEEK EQGVNKRGSF 600 RAPETCGGKL LPSSAGEYNS RPRDLGSVDS FGHSIAFVQL GDTHPLAAQP AFRTTQELAS 660 SCKSSCRLFG FSLTEGRHDA TKEDNMVQAT SSLAPGAFLP RIGEQFHPKP PAMTNTVRSN 720 CTKVSNLYAV RHAF

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MGGLIDLNTT EDDETPLSGS LSPSSSSASV LSVSGAAASG SSSSSSVCLE LWHACAGPLI  60
SLPKRGSVVV YFPQGHLEQV SDFSGVAAAY DLPPHVICRV VDVKLHAEGA TDEVYSQVSL  120
VPESEQIEQK LQERKTEAAG EDEDAEVDIK STTPHMFCKT LTASDTSTHG GFSVPRRAAE  180
DCFPPLDYNQ QRPSQELVAK DLHGLEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA  240
VLFLRGEDGE LRLGIRRVTQ IKNGTSFPSL CSQQLNSSTF VDVVHAISMK SVFSIYYNPR  300
ASSSEFIIPL HKFWKSLDHS FSIGMRFKMR FETEDAVERR YTGLVTGIGD MDPVRWPGSK  360
WRCLLVRWDD IDTNRHCRVS PWEIESSGSI SSSNILLTPG SKRSRVGLPS GKPEFVVTDG  420
IGASNFGESS RFPKVLQGQE ILGFNTLYDG ADSQNMHQSD IRRCFPGSNG SGIAAIGNVG  480
RDPPVNPDIS YKGVGFGESF QFHKVLQGQE IFVSPSYRRG PTADENREND GPGVSDAGQL  540
SGTRSRWSSL MQGHNAHSRI LPSAQVSSPS SVLMFQHASN PIPNLNSEEK EQGVNKRGSF  600
RAPETCGGKL LPSSAGEYNS RPRDLGSVDS FGHSIAFVQL GDTHPLAAQP AFRTTQELAS  660
SCKSSCRLFG FSLTEGRHDA TKEDNMVQAT SSLAPGAFLP RIGEQFHPKP PAMTNTVRSN  720
CTKVSNLYAV RHAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein