PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724308.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 450aa MW: 49231 Da PI: 7.0748

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724308.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.8	1.2e-05	341	378	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_022724308.1 341 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 378 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MAEEFHAGIC GETWWNPSKT MFTGCSSPCS MGIADMGSFG WGIDMVDIKA RTCDEESNNS 60 VSGSSIFFQG AHQKPQQADS DSGGTSILID STLQMMGFGL SSSTTSDWNQ PLITRNNGLD 120 SSQIQKDWSP KSYTSPGEDS SITTFKPINQ DFSLEQQRLN SVTSSGNNTP TCQGLSAGFP 180 MGTASYGYPS TLLHSLFEPD PQPQQQSLFN NRSINYMSST APYRANANEL SPSWPKLAPF 240 IRPSLPKQQP SSIHFSNNTP FWNASSTGGN DVKAGFLPSP QSQFLVQTYE KKPNCPSLTI 300 KTNIEEVRKS GGSVMKKGSS EPPFKRPRIE TPSPLPTFKV RKEKLGDRIT ALQQLVSPFG 360 KTDTASVLHE AIEYIKFLHD QVNVLSTPYM KQAAASIQQQ QSPDKLKDPE GPKQDLRSRG 420 LCLVPISSTF PVANETTADF WTPTLGGTYR

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MAEEFHAGIC GETWWNPSKT MFTGCSSPCS MGIADMGSFG WGIDMVDIKA RTCDEESNNS  60
VSGSSIFFQG AHQKPQQADS DSGGTSILID STLQMMGFGL SSSTTSDWNQ PLITRNNGLD  120
SSQIQKDWSP KSYTSPGEDS SITTFKPINQ DFSLEQQRLN SVTSSGNNTP TCQGLSAGFP  180
MGTASYGYPS TLLHSLFEPD PQPQQQSLFN NRSINYMSST APYRANANEL SPSWPKLAPF  240
IRPSLPKQQP SSIHFSNNTP FWNASSTGGN DVKAGFLPSP QSQFLVQTYE KKPNCPSLTI  300
KTNIEEVRKS GGSVMKKGSS EPPFKRPRIE TPSPLPTFKV RKEKLGDRIT ALQQLVSPFG  360
KTDTASVLHE AIEYIKFLHD QVNVLSTPYM KQAAASIQQQ QSPDKLKDPE GPKQDLRSRG  420
LCLVPISSTF PVANETTADF WTPTLGGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	4e-77	bHLH family protein