PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723955.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 545aa    MW: 60833.8 Da    PI: 5.6859
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.24.6e-1261755451374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++c +a++++d++ +  l+  l++++s +g+pmqRl ay++e+L+arl +s+s++ykal+++e +   sse ++++++++ ++P+ kf++
  XP_022723955.1 175 LKEVLIACGQALHEDDMSTVAGLMYVLEKMVSVSGEPMQRLGAYVLEGLRARLESSGSNIYKALKCKEPT---SSELMSYMHILFRICPYWKFAY 266
                     5789*****************************************************************9...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       aN  I e ++ e ++HiiDf+i qG+QW+ L+ aLa+R +gpps+RiTg+++++s+  +   l+ +g+rL++fAe+ +vpfef+  +a +  +
  XP_022723955.1 267 TSANVVIKEVMDYEPKIHIIDFQIAQGTQWMYLIAALAKRVGGPPSIRITGIDDSQSNhaRGGGLNIVGQRLSEFAESYNVPFEFHD-AAMSGCE 360
                     ******************************************************9988889999***********************.899999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+v++gEalaVn+ + lh+++desvs+ ++rd++L+lvkslsPkvv++veqe+++n+++F+ r le+l+yy+a+f+s+++  pr++++ri
  XP_022723955.1 361 IRLEHLKVQSGEALAVNFPYVLHHMPDESVSTWNHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFSRYLETLDYYTAMFESIDVACPRDDKQRI 455
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + E+++++r+ivn++aceg+er+erhe l+kWr+r+++aGF+p+pls+++++ ++ ll++++s+ yr+ee++g+l+lgW +r++ + SaWr
  XP_022723955.1 456 SAEQHCVARDIVNMIACEGTERVERHELLGKWRSRFMMAGFSPYPLSSSVTMAVRDLLKEYDSN-YRLEEREGALYLGWINRAMATSSAWR 545
                     **************************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MQTSQKHQTR ASIYHQPVKE IDPFCLPHIQ TLDDNVCSDA GSQGANVSFQ TDKDQFFTLE  60
SSTATAGFVA YDSPSALSIS SSRSPFSPLG SHSCLSDPHN SPDNTFGSPF TGSSVVGDSN  120
ELKHKLRELE ISLLGPESDI IDSCNCCFSS GAHQAASMAR LNCDQLVDMI PRLDLKEVLI  180
ACGQALHEDD MSTVAGLMYV LEKMVSVSGE PMQRLGAYVL EGLRARLESS GSNIYKALKC  240
KEPTSSELMS YMHILFRICP YWKFAYTSAN VVIKEVMDYE PKIHIIDFQI AQGTQWMYLI  300
AALAKRVGGP PSIRITGIDD SQSNHARGGG LNIVGQRLSE FAESYNVPFE FHDAAMSGCE  360
IRLEHLKVQS GEALAVNFPY VLHHMPDESV STWNHRDRLL RLVKSLSPKV VTLVEQESNT  420
NTSPFFSRYL ETLDYYTAMF ESIDVACPRD DKQRISAEQH CVARDIVNMI ACEGTERVER  480
HELLGKWRSR FMMAGFSPYP LSSSVTMAVR DLLKEYDSNY RLEEREGALY LGWINRAMAT  540
SSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein