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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022723747.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 214aa MW: 24045 Da PI: 7.145 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 58.8 | 6.6e-19 | 17 | 63 | 1 | 47 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 k+ien+ r +tfskRr gi KKA+EL +LC+ eva ++fs+ gk + XP_022723747.1 17 KKIENEEDRLITFSKRRSGIYKKASELATLCGCEVAFMVFSPAGKPF 63 68*****************************************9855 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MSGSGKKTKG RQKIEMKKIE NEEDRLITFS KRRSGIYKKA SELATLCGCE VAFMVFSPAG 60 KPFSFGHPSI ESVANRFLNQ NPPPNDNTHP LVEAHRKIRI NQLSQYLNEL LSQLDAEKEK 120 AKMLDLLTHG KQTHGWWEAP TDQLNQQELE KQYSNYEELL SNLYGKINEK SAVATSSLVA 180 PTDPAQFTDT FTTIANEEVP ASFPPGYNHG GQQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04100.1 | 3e-46 | M-type_MADS family protein |