PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022723223.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 346aa MW: 39161.9 Da PI: 9.9292

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022723223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.4	1.2e-31	125	178	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++F +ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+ XP_022723223.1 125 PRLRWTPDLHHCFEHAVERLGGEDRATPKMVLQIMNVKGLTISHVKSHLQMYRS 178 8****************************************************7 PP
2	Myb_DNA-binding	48.1	2.7e-15	126	177	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ + +av++lGg+ t+k + + m+ kg+t ++ks++q+y+ XP_022723223.1 126 RLRWTPDLHHCFEHAVERLGGEdraTPKMVLQIMNvKGLTISHVKSHLQMYR 177 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MITWPQALSP YCRNKGNYPV LRNGGALNMF LVGSANALGH LHAYGFMFHF ESFLTLRPLF 60 VLSQMKRVDG DSFLKGSPSS YLDKSGSIYS QSSTMRVTRR RMGENLPEIS LKSPVVRPYV 120 RSKMPRLRWT PDLHHCFEHA VERLGGEDRA TPKMVLQIMN VKGLTISHVK SHLQMYRSMK 180 NKQMIKEAAI EVRRNHEKVS DPINCQQNHQ LKDGRPLDRN SFQNLGPRIL PAQWNGTKAS 240 NQLSYAEEPN KGSEERSNSY IIFKDLLKSC MIQESNKQAE VGLHGGVGWK CNHQRLVDIA 300 DHQAAERISD CSTCLSLNSK VSHSMLRLGK AETLELNDVS LELTLA

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MITWPQALSP YCRNKGNYPV LRNGGALNMF LVGSANALGH LHAYGFMFHF ESFLTLRPLF  60
VLSQMKRVDG DSFLKGSPSS YLDKSGSIYS QSSTMRVTRR RMGENLPEIS LKSPVVRPYV  120
RSKMPRLRWT PDLHHCFEHA VERLGGEDRA TPKMVLQIMN VKGLTISHVK SHLQMYRSMK  180
NKQMIKEAAI EVRRNHEKVS DPINCQQNHQ LKDGRPLDRN SFQNLGPRIL PAQWNGTKAS  240
NQLSYAEEPN KGSEERSNSY IIFKDLLKSC MIQESNKQAE VGLHGGVGWK CNHQRLVDIA  300
DHQAAERISD CSTCLSLNSK VSHSMLRLGK AETLELNDVS LELTLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	5e-31	G2-like family protein