PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722420.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1248aa MW: 138929 Da PI: 9.3068

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.4e-09	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a ++ R+ +++ XP_022722420.1 47 QWTKEELEHFYEAYRKYGKD-WKKVATMIR-DRSVEMV 82 6***************99.*******.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1248 aa Download sequence
MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY 60 RKYGKDWKKV ATMIRDRSVE MVEALYTMNR KILPCFQAYL SLPDGTASVV GLIAMMTDHY 120 CVMVSLWYGI VDSTNGAWTH LGRGGSDSEQ ESNEGMGASK RRPKRSRGKL RDQPSKSLYK 180 PLPDLLHFHS AASSYGCLSL LKRRRSESRP RAVGKRTPRV PISFSHDKSK GERYFSPIRP 240 GMKLKVDAVD DNVAHVIALA LTEASQRGGS PQVSQTPNRK AETPSPVFNN ERMNAESETI 300 SAKILGSEVD EDACELSLGS TEADNADYSR AKNYSRNIEG TGTVEVQQKG KRYYRRKPEV 360 EESVNNHLED TKEACSGTEE GQRLCDLKGK FEAEVADANT SRASTKCLRK RSKKVLFGGV 420 EETSFDALQT LADLSLMMPE TAADTESSVL FKEEKNEVVE KTKPKGNHPV PGAKGTASKQ 480 SKQGKLFHHD VHAIPKAKEE SHPNNVGMLK RRRKSSPYKI PKDETDADSQ LGESPNVEAS 540 DEVKNLVSKG KRSNNVAHTK QGKSVRPSEC MSSSNIAHPK QGKSVRTPER TSASNVGHPK 600 QGKSVRPPER TSSSTDHGRD LNTSAPSTIQ VSSIHQVNLL KSRVKRKMDA QRPAIGKDIK 660 PSDIVKGKFS VPAMLFHDRA LNLKAKLCSF LSSYQARRWC AFEWFYSTID YPWFAKREFV 720 EYLDHVGLGH VPRLTRVEWG VIRSSLGKPR RFSEQFLKEE REKLNQYQES VRTHYADLRA 780 GIGEGLPTDL ARPLSVGQRV IAVHPKTREI HDGSVLIVDH SRYRIQFDSP ELGVEFIMDI 840 DCMPSYPLEN LPASLLRQNA AICKFAENYS ELKMNGQPKE SKIEENMKFS QCDNPENTDS 900 SSRTSPSTFN VGNLSQPVKV DSSSPNLQHK VGPMETVCTQ QAVNSQPSAH ALVQAREADV 960 EALSQLTRAI DKKEAVVSEL RRMNDEVLEN QKGADNCLKD SDSFKKQYAA VLLQLNEVNE 1020 QVSFALFCLR QRNSYQANSS VKLLKPLAKI GGHGCQLSSF DHSMHHVQEC VSNVAEIVES 1080 SRMKARSMVN AAMQAMSSLR KGGKSIERIE DAIDFVNNQL SLDDFSLPAL RSSTPLDSVH 1140 STVTSHDLPT ACVSYPSATS HIPDVKMQNF SDQDDLRIPS DIIVHCVATL LMTQKCTERQ 1200 FPPGDVAQVL DSAVSSLKPY CSQNLQIYSE VQKCMGIIRN QILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1248 aa Download sequence

MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY  60
RKYGKDWKKV ATMIRDRSVE MVEALYTMNR KILPCFQAYL SLPDGTASVV GLIAMMTDHY  120
CVMVSLWYGI VDSTNGAWTH LGRGGSDSEQ ESNEGMGASK RRPKRSRGKL RDQPSKSLYK  180
PLPDLLHFHS AASSYGCLSL LKRRRSESRP RAVGKRTPRV PISFSHDKSK GERYFSPIRP  240
GMKLKVDAVD DNVAHVIALA LTEASQRGGS PQVSQTPNRK AETPSPVFNN ERMNAESETI  300
SAKILGSEVD EDACELSLGS TEADNADYSR AKNYSRNIEG TGTVEVQQKG KRYYRRKPEV  360
EESVNNHLED TKEACSGTEE GQRLCDLKGK FEAEVADANT SRASTKCLRK RSKKVLFGGV  420
EETSFDALQT LADLSLMMPE TAADTESSVL FKEEKNEVVE KTKPKGNHPV PGAKGTASKQ  480
SKQGKLFHHD VHAIPKAKEE SHPNNVGMLK RRRKSSPYKI PKDETDADSQ LGESPNVEAS  540
DEVKNLVSKG KRSNNVAHTK QGKSVRPSEC MSSSNIAHPK QGKSVRTPER TSASNVGHPK  600
QGKSVRPPER TSSSTDHGRD LNTSAPSTIQ VSSIHQVNLL KSRVKRKMDA QRPAIGKDIK  660
PSDIVKGKFS VPAMLFHDRA LNLKAKLCSF LSSYQARRWC AFEWFYSTID YPWFAKREFV  720
EYLDHVGLGH VPRLTRVEWG VIRSSLGKPR RFSEQFLKEE REKLNQYQES VRTHYADLRA  780
GIGEGLPTDL ARPLSVGQRV IAVHPKTREI HDGSVLIVDH SRYRIQFDSP ELGVEFIMDI  840
DCMPSYPLEN LPASLLRQNA AICKFAENYS ELKMNGQPKE SKIEENMKFS QCDNPENTDS  900
SSRTSPSTFN VGNLSQPVKV DSSSPNLQHK VGPMETVCTQ QAVNSQPSAH ALVQAREADV  960
EALSQLTRAI DKKEAVVSEL RRMNDEVLEN QKGADNCLKD SDSFKKQYAA VLLQLNEVNE  1020
QVSFALFCLR QRNSYQANSS VKLLKPLAKI GGHGCQLSSF DHSMHHVQEC VSNVAEIVES  1080
SRMKARSMVN AAMQAMSSLR KGGKSIERIE DAIDFVNNQL SLDDFSLPAL RSSTPLDSVH  1140
STVTSHDLPT ACVSYPSATS HIPDVKMQNF SDQDDLRIPS DIIVHCVATL LMTQKCTERQ  1200
FPPGDVAQVL DSAVSSLKPY CSQNLQIYSE VQKCMGIIRN QILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	230	KRRRSESRPRAVGKRTPRVPISFSHDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein