PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722416.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1250aa MW: 139170 Da PI: 9.3068

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.4e-09	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a ++ R+ +++ XP_022722416.1 47 QWTKEELEHFYEAYRKYGKD-WKKVATMIR-DRSVEMV 82 6***************99.*******.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1250 aa Download sequence
MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY 60 RKYGKDWKKV ATMIRDRSVE MVEALYTMNR KILPCFQAYL SLPDGTASVV GLIAMMTDHY 120 CVMVSLWYGI VDSTNGAWTH LGRGGSDSEQ ESNEGMGASK RRPKRSRGKL RDQPSKSLYK 180 PLPDLLHFHS AASSYGCLSL LKRRRSESRP RAVGKRTPRV PISFSHDKSK GERYFSPIRP 240 GMKLKVDAVD DNVAHVIALA LTEASQRGGS PQVSQTPNRK AETPSPVFNN ERMNAESETI 300 SAKILGSEVD EDACELSLGS TEADNADYSR AKNYSRNIEG TGTVEVQQKG KRYYRRKPEV 360 EESVNNHLED TKEACSGTEE GQRLCDLKGK FEAEVADANT SRASTKCLRK RSKKVLFGGV 420 EETSFDALQT LADLSLMMPE TAADTESSVL FKEEKNEVVE KTKPKGNHPV PGAKGTASKQ 480 SKQGKLFHHD VHAIPKAKEE SHPNNVGMLK RRRKSSPYKL QIPKDETDAD SQLGESPNVE 540 ASDEVKNLVS KGKRSNNVAH TKQGKSVRPS ECMSSSNIAH PKQGKSVRTP ERTSASNVGH 600 PKQGKSVRPP ERTSSSTDHG RDLNTSAPST IQVSSIHQVN LLKSRVKRKM DAQRPAIGKD 660 IKPSDIVKGK FSVPAMLFHD RALNLKAKLC SFLSSYQARR WCAFEWFYST IDYPWFAKRE 720 FVEYLDHVGL GHVPRLTRVE WGVIRSSLGK PRRFSEQFLK EEREKLNQYQ ESVRTHYADL 780 RAGIGEGLPT DLARPLSVGQ RVIAVHPKTR EIHDGSVLIV DHSRYRIQFD SPELGVEFIM 840 DIDCMPSYPL ENLPASLLRQ NAAICKFAEN YSELKMNGQP KESKIEENMK FSQCDNPENT 900 DSSSRTSPST FNVGNLSQPV KVDSSSPNLQ HKVGPMETVC TQQAVNSQPS AHALVQAREA 960 DVEALSQLTR AIDKKEAVVS ELRRMNDEVL ENQKGADNCL KDSDSFKKQY AAVLLQLNEV 1020 NEQVSFALFC LRQRNSYQAN SSVKLLKPLA KIGGHGCQLS SFDHSMHHVQ ECVSNVAEIV 1080 ESSRMKARSM VNAAMQAMSS LRKGGKSIER IEDAIDFVNN QLSLDDFSLP ALRSSTPLDS 1140 VHSTVTSHDL PTACVSYPSA TSHIPDVKMQ NFSDQDDLRI PSDIIVHCVA TLLMTQKCTE 1200 RQFPPGDVAQ VLDSAVSSLK PYCSQNLQIY SEVQKCMGII RNQILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1250 aa Download sequence

MAPSRKPKSV NKKFSYVNEL ASAKNGDSSA KKSGQRKRKL SDMLGPQWTK EELEHFYEAY  60
RKYGKDWKKV ATMIRDRSVE MVEALYTMNR KILPCFQAYL SLPDGTASVV GLIAMMTDHY  120
CVMVSLWYGI VDSTNGAWTH LGRGGSDSEQ ESNEGMGASK RRPKRSRGKL RDQPSKSLYK  180
PLPDLLHFHS AASSYGCLSL LKRRRSESRP RAVGKRTPRV PISFSHDKSK GERYFSPIRP  240
GMKLKVDAVD DNVAHVIALA LTEASQRGGS PQVSQTPNRK AETPSPVFNN ERMNAESETI  300
SAKILGSEVD EDACELSLGS TEADNADYSR AKNYSRNIEG TGTVEVQQKG KRYYRRKPEV  360
EESVNNHLED TKEACSGTEE GQRLCDLKGK FEAEVADANT SRASTKCLRK RSKKVLFGGV  420
EETSFDALQT LADLSLMMPE TAADTESSVL FKEEKNEVVE KTKPKGNHPV PGAKGTASKQ  480
SKQGKLFHHD VHAIPKAKEE SHPNNVGMLK RRRKSSPYKL QIPKDETDAD SQLGESPNVE  540
ASDEVKNLVS KGKRSNNVAH TKQGKSVRPS ECMSSSNIAH PKQGKSVRTP ERTSASNVGH  600
PKQGKSVRPP ERTSSSTDHG RDLNTSAPST IQVSSIHQVN LLKSRVKRKM DAQRPAIGKD  660
IKPSDIVKGK FSVPAMLFHD RALNLKAKLC SFLSSYQARR WCAFEWFYST IDYPWFAKRE  720
FVEYLDHVGL GHVPRLTRVE WGVIRSSLGK PRRFSEQFLK EEREKLNQYQ ESVRTHYADL  780
RAGIGEGLPT DLARPLSVGQ RVIAVHPKTR EIHDGSVLIV DHSRYRIQFD SPELGVEFIM  840
DIDCMPSYPL ENLPASLLRQ NAAICKFAEN YSELKMNGQP KESKIEENMK FSQCDNPENT  900
DSSSRTSPST FNVGNLSQPV KVDSSSPNLQ HKVGPMETVC TQQAVNSQPS AHALVQAREA  960
DVEALSQLTR AIDKKEAVVS ELRRMNDEVL ENQKGADNCL KDSDSFKKQY AAVLLQLNEV  1020
NEQVSFALFC LRQRNSYQAN SSVKLLKPLA KIGGHGCQLS SFDHSMHHVQ ECVSNVAEIV  1080
ESSRMKARSM VNAAMQAMSS LRKGGKSIER IEDAIDFVNN QLSLDDFSLP ALRSSTPLDS  1140
VHSTVTSHDL PTACVSYPSA TSHIPDVKMQ NFSDQDDLRI PSDIIVHCVA TLLMTQKCTE  1200
RQFPPGDVAQ VLDSAVSSLK PYCSQNLQIY SEVQKCMGII RNQILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	230	KRRRSESRPRAVGKRTPRVPISFSHDKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein