PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721581.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 601aa MW: 66252 Da PI: 8.8487

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721581.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	486	534	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_022721581.1 486 AWTLSEVMKLVEGVSKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 534 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
METVVKVEGG DEGKFEETGL EKSNLILSSP KHVADPVVYK LVRVEGDGRL VPATDDELME 60 VEGLLENEKC ETQIVADTGH VLGCTSNEVS SPGMPQLGSS EGLSHSEITE ADTEKLSARI 120 EEMVPSRTQC SSDNHVTQSW SVGEHSKRLV GSIEGGSSSS VGCISSKPDF SKLKDEICLD 180 NLSIKELHEV FKATFGRDTT VKDKQWLKRR IAMGLTNFCD VSTATFVIKD NKLVKKGKED 240 SCNNVNLSTG IELPAVGVEY HEDLLNSHSH QIDEHQTTSG MRSGNNGVED NCGSEPLAAD 300 QRAAKRVRRP TKRYIEELSE AEYKEYRGRL ISSTKNIEIR PLASKSHARP ARNVSLEGRT 360 VMMRLDSFGG SGIQVPCVYR VRRSQPRKNV MALLKFHPSG IGRTATLVRK CLDVHGSQMD 420 NGSVNKVLKT KSAPEQTPQQ YVAESKKERP SAELGQNMGL KQDTSDGNVV TVRTAKGGIR 480 RKHHRAWTLS EVMKLVEGVS KYGAGRWSEI KRLAFASYSY RTSVDLKDKW RNLLKASFAW 540 TPVDKGVNSR KHPAMPIPAP ILLRVRELAE MHSQVPPPSH CASKQAACGG RSVYETRPGY 600 S

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

METVVKVEGG DEGKFEETGL EKSNLILSSP KHVADPVVYK LVRVEGDGRL VPATDDELME  60
VEGLLENEKC ETQIVADTGH VLGCTSNEVS SPGMPQLGSS EGLSHSEITE ADTEKLSARI  120
EEMVPSRTQC SSDNHVTQSW SVGEHSKRLV GSIEGGSSSS VGCISSKPDF SKLKDEICLD  180
NLSIKELHEV FKATFGRDTT VKDKQWLKRR IAMGLTNFCD VSTATFVIKD NKLVKKGKED  240
SCNNVNLSTG IELPAVGVEY HEDLLNSHSH QIDEHQTTSG MRSGNNGVED NCGSEPLAAD  300
QRAAKRVRRP TKRYIEELSE AEYKEYRGRL ISSTKNIEIR PLASKSHARP ARNVSLEGRT  360
VMMRLDSFGG SGIQVPCVYR VRRSQPRKNV MALLKFHPSG IGRTATLVRK CLDVHGSQMD  420
NGSVNKVLKT KSAPEQTPQQ YVAESKKERP SAELGQNMGL KQDTSDGNVV TVRTAKGGIR  480
RKHHRAWTLS EVMKLVEGVS KYGAGRWSEI KRLAFASYSY RTSVDLKDKW RNLLKASFAW  540
TPVDKGVNSR KHPAMPIPAP ILLRVRELAE MHSQVPPPSH CASKQAACGG RSVYETRPGY  600
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-123	MYB_related family protein